PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G39820.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 660aa MW: 73136.6 Da PI: 4.939

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G39820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	50.6	4.2e-16	530	559	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPk++ ++mkv+gLt++hvkSHLQkYR+ ONIVA02G39820.1 530 EATPKAVQKVMKVDGLTIYHVKSHLQKYRT 559 7****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MEELLGLVRG FVDVLVLAGG RTSSGAAATW RSGDVKKALQ WALFFEEVFK NLRDDGQYDE 60 SASELDAALV QLASSPNFPK GIEDIRSKTL AMARELVVKH FLKTTNAENL GAVLQAVVEM 120 DMDGISASGE CNVCQEYVQS ILDMNLPSLM RTKNARDVGH STSSDEFCEE SLFTGNSQIL 180 LKELQKKLDS GSCISLAERE LNTLLKSMKK DSFDSAGSTL CTSATAQKTQ IIDKFILWKQ 240 WKAKCLSYLL DERTIRIMSG TNMIFNAPKE QWMGLFEPLK VSADSSQSGI IEVMEMDICE 300 YARQSLESEP YILWLLPPVL TAAAMPPRSS LFKIYLVEID KQLGEAASKD RKCNCGGDGI 360 DQHQNSSNFT SDLYINKSES PNGKLSSESY AIDTSGCDSS LPPTQSLYKG NPSSLRMVYP 420 KVSEQNSWSQ EPLPGPFVCP TSVDFFDQQD MTIFDQQIQD NIAASPSTNL AKQNEWFSSG 480 TSLQYLESSV SAGSVLKAVD ATSTTPSNYL HCHAQRNTSN PPNFNEICSE ATPKAVQKVM 540 KVDGLTIYHV KSHLQKYRTV HHRPQLSDGR GMETTCEGLR VQIGLQKQLH EQLEIQRKLQ 600 LQVEEHSKYL AMIIEKQSES LRQLGALPRS LDAPTQVLDN RETCEGQTGD ADSAEQKPEK

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MEELLGLVRG FVDVLVLAGG RTSSGAAATW RSGDVKKALQ WALFFEEVFK NLRDDGQYDE  60
SASELDAALV QLASSPNFPK GIEDIRSKTL AMARELVVKH FLKTTNAENL GAVLQAVVEM  120
DMDGISASGE CNVCQEYVQS ILDMNLPSLM RTKNARDVGH STSSDEFCEE SLFTGNSQIL  180
LKELQKKLDS GSCISLAERE LNTLLKSMKK DSFDSAGSTL CTSATAQKTQ IIDKFILWKQ  240
WKAKCLSYLL DERTIRIMSG TNMIFNAPKE QWMGLFEPLK VSADSSQSGI IEVMEMDICE  300
YARQSLESEP YILWLLPPVL TAAAMPPRSS LFKIYLVEID KQLGEAASKD RKCNCGGDGI  360
DQHQNSSNFT SDLYINKSES PNGKLSSESY AIDTSGCDSS LPPTQSLYKG NPSSLRMVYP  420
KVSEQNSWSQ EPLPGPFVCP TSVDFFDQQD MTIFDQQIQD NIAASPSTNL AKQNEWFSSG  480
TSLQYLESSV SAGSVLKAVD ATSTTPSNYL HCHAQRNTSN PPNFNEICSE ATPKAVQKVM  540
KVDGLTIYHV KSHLQKYRTV HHRPQLSDGR GMETTCEGLR VQIGLQKQLH EQLEIQRKLQ  600
LQVEEHSKYL AMIIEKQSES LRQLGALPRS LDAPTQVLDN RETCEGQTGD ADSAEQKPEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	7e-28	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G39820.1