PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G39640.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 334aa    MW: 36545.9 Da    PI: 7.4375
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G39640.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.13.7e-49101571128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk........lelee.......vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79 
                      lppGfrF P+deelv++yL++kv +++                    ++ evd++++ePw+Lp  +k +++ewyfFs rd+kyatg r+nratk
  ONIVA02G39640.1  10 LPPGFRFYPSDEELVCHYLHNKVVNQHrfagvgggA---AaaaagggTMVEVDLHTHEPWELPDVAKLSTNEWYFFSFRDRKYATGLRTNRATK 100
                      79********************99999665555551...055566667***************87788999*********************** PP

              NAM  80 sgyWkatgkdkevlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      sgyWkatgkd+ +++         + + vg++ktLvfy+grap+g+kt+Wvmhe+r+
  ONIVA02G39640.1 101 SGYWKATGKDRVIHNPklhaaahrRASIVGMRKTLVFYRGRAPNGVKTNWVMHEFRM 157
                      **************98777776655556***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MGLRDIELTL PPGFRFYPSD EELVCHYLHN KVVNQHRFAG VGGGAAAAAA GGGTMVEVDL  60
HTHEPWELPD VAKLSTNEWY FFSFRDRKYA TGLRTNRATK SGYWKATGKD RVIHNPKLHA  120
AAHRRASIVG MRKTLVFYRG RAPNGVKTNW VMHEFRMENP HTPPKEDWVL CRVFYKKKAE  180
TETESSYSME NEQEAVIAMA RSAAVIKAGG CYSNSSSSHD PAAAGHHSPP PFPASLAACS  240
SSHHYSSHPP PPPDHHHHHH MPVTGGGGGS LNEFIPTTSM ALYSSIFDFS QHLDGGAVAA  300
SASAAGSRVD GGEQCGLMEL GLEEHYNYNG LMPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.15e-78NAC family protein