PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G37060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 365aa MW: 40138.5 Da PI: 4.6938 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.2 | 2e-18 | 119 | 168 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++G+r+++ +g+W+AeIrdp++ r++lg+f +aeeAa+a++a +++++g ONIVA02G37060.1 119 QFRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNSAEEAARAYDAEARRIRG 168 69*******.**********954...4************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 365 aa Download sequence |
MCGGAIIHHL KGHPEGSRRA TEGLLWPEKK KPRWGGGGRR HFGGFVEEDD EDFEADFEEF 60 EVDSGDSDLE LGEEDDDDVV EIKPAAFKRA LSRDNLSTIT TAGFDGPAAK SAKRKRKNQF 120 RGIRQRPWGK WAAEIRDPRK GVRVWLGTFN SAEEAARAYD AEARRIRGKK AKVNFPEAPT 180 TAQKRRAGST TAKAPKSSVE QKPTVKPAFN NLANANAFVY PSANFTSNKP FVQPDNMPFV 240 PAKNSAAPIE DPIINSDQGS NSFGCSDFGW ENDTKTPDIT SIAPISTIAE VDESAFIKSS 300 TNPMVPPVME NSAVDLPDLE PYMRFLLDDG AGDSIDSLLN LDGSQDVVSN MDLWSFDDMP 360 VSDFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53910.3 | 4e-36 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G37060.1 |