PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G36570.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 658aa MW: 73094 Da PI: 5.5065

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G36570.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.4	1.4e-07	541	588	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +WT E +lvd+v+++G g W+ I r Rt ++k++w+++ ONIVA02G36570.1 541 AWTLCEVVKLVDGVARYGAGKWSEIRRLAFssySYRTSVDLKDKWRNL 588 7*************************99999***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 658 aa Download sequence
MEQKKIPRLV SSAPCAISRL NRGGAPISVW RAEQGEGILV GGPQDALDNR SDDNDFDKND 60 NSDPVVYQLV RVEGDGTLIP ATEDEVLQFE TFLHDEKVDD DLPSIDDVTH VEEYFTNDCI 120 VKKPEFEEGP SKLDTADVQT QKLDAGLEED RLCTLNDSIV LPSNCSAVHD QQLDKLNTEQ 180 GANIIAQQDN ASTETTKSTV LNDLSSDKEK ADACSKPVNE ASAGQSVSGV TSSVPDFSIL 240 KGEVCLDDLT MRELQEAFRA TFGRQTTVKD KLWLKRRIAM GLINSCDVPS SGCVVRDYKV 300 IAMGAKQEIP VVEAIPKMEL EANLVRDQVM NPGHERDLPS SLSYHSEEQQ RSSKRLKRVP 360 TDNDEPQVTI FAEQGTTKRI RKPTKRYIEE LSDIDTHEST GRLSSPGKRH VYDEVLLRPR 420 IAPLHEVDSL STAYPTREDT LGGCSVHVPY VSRMRRGRPR SNFIPFLDPE PSVECTEAPA 480 ADVVNLEKEG ERKNHKNTGK KGVHVETSGE KDVQGLQDKD FCNSDDNPKT KRDGKRKHHR 540 AWTLCEVVKL VDGVARYGAG KWSEIRRLAF SSYSYRTSVD LKDKWRNLIR ASQTQLSTEN 600 DGVCPRKSNP SAIPIPVSIL LRVKKLAEMQ SQAGDVRVPI KFSGQSTTVV QGKVSGFL

Sequence ? help Back to Top

Protein Sequence Length: 658 aa Download sequence

MEQKKIPRLV SSAPCAISRL NRGGAPISVW RAEQGEGILV GGPQDALDNR SDDNDFDKND  60
NSDPVVYQLV RVEGDGTLIP ATEDEVLQFE TFLHDEKVDD DLPSIDDVTH VEEYFTNDCI  120
VKKPEFEEGP SKLDTADVQT QKLDAGLEED RLCTLNDSIV LPSNCSAVHD QQLDKLNTEQ  180
GANIIAQQDN ASTETTKSTV LNDLSSDKEK ADACSKPVNE ASAGQSVSGV TSSVPDFSIL  240
KGEVCLDDLT MRELQEAFRA TFGRQTTVKD KLWLKRRIAM GLINSCDVPS SGCVVRDYKV  300
IAMGAKQEIP VVEAIPKMEL EANLVRDQVM NPGHERDLPS SLSYHSEEQQ RSSKRLKRVP  360
TDNDEPQVTI FAEQGTTKRI RKPTKRYIEE LSDIDTHEST GRLSSPGKRH VYDEVLLRPR  420
IAPLHEVDSL STAYPTREDT LGGCSVHVPY VSRMRRGRPR SNFIPFLDPE PSVECTEAPA  480
ADVVNLEKEG ERKNHKNTGK KGVHVETSGE KDVQGLQDKD FCNSDDNPKT KRDGKRKHHR  540
AWTLCEVVKL VDGVARYGAG KWSEIRRLAF SSYSYRTSVD LKDKWRNLIR ASQTQLSTEN  600
DGVCPRKSNP SAIPIPVSIL LRVKKLAEMQ SQAGDVRVPI KFSGQSTTVV QGKVSGFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	4e-85	MYB_related family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G36570.1