PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G36110.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 1062aa MW: 114332 Da PI: 6.4822

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G36110.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95	5.1e-30	402	461	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ ONIVA02G36110.1 402 MNDGCQWRKYGQKVAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILVTTYEGTHNHP 461 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1062 aa Download sequence
MTWDNRIKEE SSLLIALLIR LKHPDIDLDA SGEVALGFKT VPHFSCTKRD KGTQDNQKEA 60 RSMSSKKKRA AIDLSLEAER RRPEEGGGGS DREASDGAAA AAEEDGDVKQ REGPKEETGG 120 EEEKVVEVVV DQGEDGSNEE IKYRTQQAEM IEEDKQPAAA ANVDDDGGDS DGVGASTEEK 180 HMVTEATGGE GDDGGDSRTP MAQDELSEMQ EEMERMKEEN RMLRRVVDKT VRDYYELQMK 240 LAAYQQQPAA ADEPKETEVF LSLGATAAAS AGCGGGFPEA KSKEQAAWRR RSVGSDDSDG 300 GKEDLGLSLS LGASSSYDDD QKAVEARPHD VDGAAAAAMI GGDGSRPAPR GYALLESSKV 360 QGGAAPAAGE LAAGGGITSQ SVNPANRKTR VSVRVRCQGP TMNDGCQWRK YGQKVAKGNP 420 CPRAYYRCTV APGCPVRKQV QRCLEDMSIL VTTYEGTHNH PLPVGATAMA STTSAAATFM 480 LLSSTTSSSS VSDASAAPSS SYLSPYLLNS ASPLLMPGAT GGGGGMQHLN LFGNSPSSSS 540 LLAPQAPGSS KYPWSPNHPP LAGAGGNKRP FWSAGGDGDK PAPAALAENV GAVMSDPNKF 600 SAAIAAAINN FMGKDGESSS GKSSTFAWTR SMDCTATPAS VPAPARPRRE PGCPCLSPFS 660 LSLGLLLSSS SSSSPTPSRP RAHRRRNPAD LLRSRIGRSP PGSRSGRGPD MLHVSEEMAR 720 SARARRHVAR QLRSAPYPIP SYRWKAMKES NRKKTLPAAQ KMDWEDANCS VCMEYPHNAV 780 LLLCSSHDKG CRPYMCGTSH RHSNCLDQFK KAYTKGALLE ELPANTVGTN LDSTPLIAGE 840 KNESVDLACP LCRGKVKGWT IVEPARSYLN GKRRTCMQDG CSFVGTYKEL RKHVKSEHPL 900 AKPREVDPIL EQKWRLLEIE RERQDALSTI TATMGRAIVF GDYVLDLEDE DDLDDVESDE 960 DDNANGHGTD NTRRMLMFLM RQVARHHQNQ RLQNAIGTTG GAEDNYAVSS GANATTPYHY 1020 PLEGDDEDDL VMAGGGSTGM VRPERRRRRR RRNRERLFLG AN

Sequence ? help Back to Top

Protein Sequence Length: 1062 aa Download sequence

MTWDNRIKEE SSLLIALLIR LKHPDIDLDA SGEVALGFKT VPHFSCTKRD KGTQDNQKEA  60
RSMSSKKKRA AIDLSLEAER RRPEEGGGGS DREASDGAAA AAEEDGDVKQ REGPKEETGG  120
EEEKVVEVVV DQGEDGSNEE IKYRTQQAEM IEEDKQPAAA ANVDDDGGDS DGVGASTEEK  180
HMVTEATGGE GDDGGDSRTP MAQDELSEMQ EEMERMKEEN RMLRRVVDKT VRDYYELQMK  240
LAAYQQQPAA ADEPKETEVF LSLGATAAAS AGCGGGFPEA KSKEQAAWRR RSVGSDDSDG  300
GKEDLGLSLS LGASSSYDDD QKAVEARPHD VDGAAAAAMI GGDGSRPAPR GYALLESSKV  360
QGGAAPAAGE LAAGGGITSQ SVNPANRKTR VSVRVRCQGP TMNDGCQWRK YGQKVAKGNP  420
CPRAYYRCTV APGCPVRKQV QRCLEDMSIL VTTYEGTHNH PLPVGATAMA STTSAAATFM  480
LLSSTTSSSS VSDASAAPSS SYLSPYLLNS ASPLLMPGAT GGGGGMQHLN LFGNSPSSSS  540
LLAPQAPGSS KYPWSPNHPP LAGAGGNKRP FWSAGGDGDK PAPAALAENV GAVMSDPNKF  600
SAAIAAAINN FMGKDGESSS GKSSTFAWTR SMDCTATPAS VPAPARPRRE PGCPCLSPFS  660
LSLGLLLSSS SSSSPTPSRP RAHRRRNPAD LLRSRIGRSP PGSRSGRGPD MLHVSEEMAR  720
SARARRHVAR QLRSAPYPIP SYRWKAMKES NRKKTLPAAQ KMDWEDANCS VCMEYPHNAV  780
LLLCSSHDKG CRPYMCGTSH RHSNCLDQFK KAYTKGALLE ELPANTVGTN LDSTPLIAGE  840
KNESVDLACP LCRGKVKGWT IVEPARSYLN GKRRTCMQDG CSFVGTYKEL RKHVKSEHPL  900
AKPREVDPIL EQKWRLLEIE RERQDALSTI TATMGRAIVF GDYVLDLEDE DDLDDVESDE  960
DDNANGHGTD NTRRMLMFLM RQVARHHQNQ RLQNAIGTTG GAEDNYAVSS GANATTPYHY  1020
PLEGDDEDDL VMAGGGSTGM VRPERRRRRR RRNRERLFLG AN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1042	1051	RPERRRRRRR
2	1045	1050	RRRRRR
3	1045	1051	RRRRRRR
4	1045	1052	RRRRRRRR
5	1046	1051	RRRRRR
6	1046	1052	RRRRRRR
7	1046	1056	RRRRRRRNRER
8	1046	1053	RRRRRRRR
9	1047	1052	RRRRRR
10	1047	1054	RRRRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	1e-48	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G36110.1