PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G35380.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 304aa MW: 34083.7 Da PI: 7.8228

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G35380.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.7	6.9e-51	14	152	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...lelee............vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79 lppGfrFhP+d+elv +yL++k+ + v+ +vd++k+ePwdLp+ + + kewyf+s rd+kyatg+r+nrat+ ONIVA02G35380.1 14 LPPGFRFHPRDDELVLDYLERKLLDGGvggA---AaaaaavtiygcpVMVDVDLNKCEPWDLPEIACVGGKEWYFYSLRDRKYATGQRTNRATE 104 79*******************99996651...23445667788878***********7666689******************** PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 sgyWkatgkd+++ + kg lvg++ktLvfykgrapkg+kt+Wvmhe+r ONIVA02G35380.1 105 SGYWKATGKDRPISR-KGLLVGMRKTLVFYKGRAPKGKKTEWVMHEFRK 152 *********99.999**************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MSGMNSLSMV EARLPPGFRF HPRDDELVLD YLERKLLDGG VGGAAAAAAA VTIYGCPVMV 60 DVDLNKCEPW DLPEIACVGG KEWYFYSLRD RKYATGQRTN RATESGYWKA TGKDRPISRK 120 GLLVGMRKTL VFYKGRAPKG KKTEWVMHEF RKEGQGDPMK LPLKEDWVLC RVFYKSRTTI 180 AKLPTEGSYN NIDSVATTSL PPLTDNYIAF DQPGSMQNLE GYEQVPCFSN NPSQQPSSSM 240 NVPLTSAMVD QEQNNMGRAI KDVLSQFTKF EGNVKREALQ SNFSQDGFDY LAESGFTQMW 300 NSLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-89	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G35380.1