PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G34790.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MIKC_MADS
Protein Properties Length: 228aa    MW: 25743.3 Da    PI: 9.9198
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G34790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.58.7e-291059251
                     ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
           SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                     ri+n++ rqvtfskRrng+lKKA+ELS+LCdaev +++fsstg+lye+ss
  ONIVA02G34790.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSS 59
                     8***********************************************96 PP

2K-box61.53.4e-2180170999
            K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                      +++++ + +q+e+a L+++++nLq+++++l+Ge+L+ L +++Lq Le++Le sl++iR +K  l++++  el +  + +++++ +L +kl+
  ONIVA02G34790.1  80 NATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKGSLIHQENIELSRSLNVMSQQKLELYNKLQ 170
                      56788999************************************************************99999999999999999999886 PP

Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELSILCD AEVGLVVFSS TGRLYEFSST  60
NMKTVIDRYT NAKEELLGGN ATSEIKIWQR EAASLRQQLH NLQESHKQLM GEELSGLGVR  120
DLQGLENRLE ISLRNIRMRK GSLIHQENIE LSRSLNVMSQ QKLELYNKLQ ACEQRGATDA  180
NESSSTPYSF RIIQNANMPP SLELSQSQQR EGECSKTAAP ELGRLHLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.11e-82MIKC_MADS family protein