PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G34070.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bHLH | ||||||||
Protein Properties | Length: 458aa MW: 50546.6 Da PI: 9.6022 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.3 | 0.00031 | 190 | 207 | 2 | 19 |
HHHHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsa 19 r +h++ E+rRR +iN++ ONIVA02G34070.5 190 RSKHSATEQRRRTKINDR 207 889*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence |
MQLFQGEEPA HDFLSLRAGG GSSSPPFQHR EEQHSSHSSR GYGMEIRRSL RPLELAKQRG 60 RSSGNGTAAG SAVDGASPAG SDSEEHVLPG GVGTFSIRHA SGTPSREEAG SHGGVRRSAF 120 AFAPALHGAR MENAHETGGR SGSRAHRAPS TMWQDSAIDQ RSIGQTPYEA TRAEGRSSAS 180 SADQGPSTPR SKHSATEQRR RTKINDRQAS RGLKYFVNSC HTLIRRETKL LSFRRFLQEK 240 VQKYEEADPE RNHEDSKSMP WAKVYYRSCW RNTKNTSQVQ GEDLSPSTQD MNNEQYGPKH 300 ISAAQPALFN TQSVTSTTTS SSHMATGTPQ NLEKNSTPSN QPPWLSMSTM RQESEPGNKM 360 PNKHEKQTLH DENHSISSAY SQGLFNRLTE ALKKSGLDPS QANIAVEINL AKRARDNTSD 420 NSKIVCLIII LYLCPDFTSQ INEDEEPIQI TKRRCNKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08130.3 | 2e-17 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G34070.5 |