PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G33420.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 242aa    MW: 25825.9 Da    PI: 7.4288
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G33420.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62e-20120170155
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      s+y+GVr+++ +g+W+AeIrdp+    r  r +lg+f+tae+Aa+a++ a+++++g
  ONIVA02G33420.1 120 SRYRGVRRRP-WGKWAAEIRDPR----RaVRKWLGTFDTAEDAARAYDVAALEFRG 170
                      79********.**********82....48*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MVPRVERGGG GFHLPNSERE DSLFIRALIS VVSGDTTVPT LLPEPTMATV VAGAATCARC  60
GVDGCIGVDC EVVVLAAAAG SSSSDEEDEG ECTTGAVASG GVTGGVGKRR PRRRSGGEGS  120
RYRGVRRRPW GKWAAEIRDP RRAVRKWLGT FDTAEDAARA YDVAALEFRG QRAKLNFPAS  180
TAAQQPRPLL HHNLRENCGS NASSPVHAPE HARTAAAAKD QEIWDGLREI MMLDDGSFWS  240
MP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109114RRPRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.12e-16ERF family protein