PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G30970.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GRF | ||||||||
Protein Properties | Length: 209aa MW: 22052.1 Da PI: 9.8369 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 80.2 | 1.8e-25 | 133 | 177 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 +++pgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr rsrk++e+ ONIVA02G30970.1 133 EPDPGRCRRTDGKKWRCSRDVVPGHKYCERHVHRGRGRSRKPVEA 177 699***************************************997 PP | |||||||
2 | QLQ | 52.3 | 1.7e-18 | 68 | 103 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 a+T +Q q+L++Q+l+y+y+aa++PvP +L+++i+k ONIVA02G30970.1 68 ALTFMQQQELEHQVLIYRYFAAGAPVPVHLVLPIWK 103 79*********************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MGEEKEADSP QPPSKLPRLS GADPNAGVVT MAAPPPPVGL GLGLGLGGDS RGERDVEASA 60 AAAHKATALT FMQQQELEHQ VLIYRYFAAG APVPVHLVLP IWKSVASSSF GPHRFPSLMG 120 LGNLCFDYRS SMEPDPGRCR RTDGKKWRCS RDVVPGHKYC ERHVHRGRGR SRKPVEASAA 180 ATPANNGGGG GIVFSPTSVL LAHGAARAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36400.1 | 8e-37 | GRF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G30970.1 |