PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G30630.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 261aa    MW: 27002.8 Da    PI: 5.8317
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G30630.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.2e-1671119356
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                      y+G+r ++ +g+Wv+eIr+p+    + +r++lg++ tae+Aa+a++ a+++l+g+
  ONIVA02G30630.1  71 YRGIR-CR-SGKWVSEIREPR----KaRRIWLGTYPTAEMAAAAYDVAARALRGA 119
                      9***9.55.6*********94....36*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MADLTEHPSP TAPPQVQTAG LPVAASPGPA SPHSPSEQGD KTAPGAATAS TMTTASSGEP  60
SPRSSGKHAF YRGIRCRSGK WVSEIREPRK ARRIWLGTYP TAEMAAAAYD VAARALRGAD  120
AVLNFPGATA SRPVPASASP ADIRAAAAAA AAAAAHLERP HGPTGTAYPA TAAAEHHHQQ  180
QQQQYGSGSP AADDVSGYPP MEGGIGNDDF MDEEAIFELP QLLRNMAAGM MMSPPRLSPT  240
TSDVSPEPSE AGESLWSYRD P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.18e-20ERF family protein