PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G30520.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HD-ZIP
Protein Properties Length: 804aa    MW: 86077.3 Da    PI: 5.4935
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G30520.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.63.3e-2199154156
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
         Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                      +++ +++t++q++eLe+lF+++++p++++r+eL+++l+L+ rqVk+WFqNrR+++k
  ONIVA02G30520.1  99 KKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRLSLDARQVKFWFQNRRTQMK 154
                      678899***********************************************999 PP
2START187.18.9e-593145461206
                      HHHHHHHHHHHHHHHHC-TT-EEEE......EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHH.HHHHHHCCCGGCT-TT-S....E CS
            START   1 elaeeaaqelvkkalaeepgWvkss......esengdevlqkfeeskv.....dsgealrasgvvdmvla.llveellddkeqWdetla....k 78 
                      ela +a++elvk+a+ ++p+Wv         e +n +e+l +f +  +     + +ea+r+sg+v+ +    lve+l+d + +W+ ++     k
  ONIVA02G30520.1 314 ELAISAMDELVKMAQMDDPLWVPALpgspskEVLNFEEYLHSFLPCIGmkpagYVSEASRESGLVIIDNSlALVETLMDER-RWSDMFScmiaK 406
                      57889*****************99978888888888888888888877*****************9876658999999999.************ PP

                      EEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE..-TTS--....-TTSEE-EESSEEEEEEEECTC CS
            START  79 aetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvd..seqkppe...sssvvRaellpSgiliepksng 160
                      a++le +s+g      gal lm+aelq+lsplvp R+++f+R+++ql +g w++vdvS+d  ++++++    + + v++++ pSg+++++++ng
  ONIVA02G30520.1 407 ATVLEEVSTGiagsrnGALLLMKAELQVLSPLVPiREVTFLRFCKQLAEGAWAVVDVSIDglVRDHNSGtapTGGNVKCRRVPSGCVMQDTPNG 500
                      ***********************************************************96556666667678899****************** PP

                      EEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
            START 161 hskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                      ++kvtwveh++++++++h+l+r+l++sgla+ga++w+atlqrqce+
  ONIVA02G30520.1 501 YCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCEC 546
                      ********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 804 aa     Download sequence    
MSFGGLFDGG GGGGMQFPFA SGFASSPALS LALDNAGGGI GGRMLGGGTG AGSSAGGAMT  60
RDTEAENDSR SGSDHLDAIS AAGEDDVEDA EPSNSRKRKK RYHRHTPQQI QELEALFKEC  120
PHPDEKQRAE LSRRLSLDAR QVKFWFQNRR TQMKTQLERH ENALLKQEND KLRAENMTIR  180
EAMRSPMCGS CGSPAMLGEV SLEEQHLRIE NARLKDELNR VCALATKFLG KPISLLSPPP  240
LLQPHLSLPM PNSSLELAIG GIGGLGSLGT LPGCMNEFAG GVSSPMGTVI TPARATGAAI  300
PSLVGNIDRS VFLELAISAM DELVKMAQMD DPLWVPALPG SPSKEVLNFE EYLHSFLPCI  360
GMKPAGYVSE ASRESGLVII DNSLALVETL MDERRWSDMF SCMIAKATVL EEVSTGIAGS  420
RNGALLLMKA ELQVLSPLVP IREVTFLRFC KQLAEGAWAV VDVSIDGLVR DHNSGTAPTG  480
GNVKCRRVPS GCVMQDTPNG YCKVTWVEHT EYDEASVHQL YRPLLRSGLA FGARRWLATL  540
QRQCECLAIL MSSATVTAND STAISQEGKR SMLKLARRMT ENFCAGVSAS SAREWSKLDG  600
ATGSIGEDVR VMARKSVSEP GEPPGVVLSA ATSVWVPVAP EKLFNFLRDE QLRAEWDILS  660
NGGPMQEMTQ IAKGQRDGNS VSLLRASAVS ANQSSMLILQ ETCTDASGSI VVYAPVDIPA  720
MQLVMNGGDS TYVALLPSGF AILPDGPRIG ATGYETGGSL LTVAFQILVN NQPTAKLTVE  780
SVETVNNLIS CTIKKIKTAL QCDA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14148GGRMLGGG
296100RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61150.10.0HD-ZIP family protein