PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G29390.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 715aa    MW: 74138.9 Da    PI: 6.3129
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G29390.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS282.61.2e-863577143374
             GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      + L ++A+a ++g+   a+++Larl+++  p g+p+ R a+y+ eAL   la+s +++++      t++ +++ +laa+k fs++sP+l+f+++
  ONIVA02G29390.1 357 DELAAAAKATEAGNSVGAREILARLNQQLPPLGKPFLRSASYLREALLLALADSHHGVSS-----VTTPLDVALKLAAYKSFSDLSPVLQFANF 445
                      7899*************************************************6666553.....444456889******************** PP

             GRAS  97 taNqaIleavege..ervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                      ta qa+l+++ g   +++H+iDfd++ G+QW+++lq+La R+       p l++T+++s +s++  el+ t+++L++fA+ lg+pfefn++   
  ONIVA02G29390.1 446 TATQALLDEIGGTatSCIHVIDFDLGVGGQWASFLQELAHRRaaggVTLPLLKLTAFVSTASHHPLELHLTQDNLSQFAADLGIPFEFNAV--- 536
                      ************98899**********************99976544599****************************************8... PP

             GRAS 185 rledleleeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                      +l+++++ eL  ++ +E++aV+l +          +     +++L+lvk+lsPk+vv +++ ad+ + sF ++fl++++ ++ l+dsl+a  + 
  ONIVA02G29390.1 537 SLDAFNPGELISSTgDEVVAVSLPVGCSARA---PP----LPAILRLVKQLSPKIVVAIDHGADRADLSFSQHFLNCFQSCVFLLDSLDAA-GI 622
                      9*********888889********9777665...44....556*********************************************888.78 PP

             GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                      +++ + k+Er+l+++++ ++v  +++       ++  Wr+ + +aGFkpvp s+ a++qa++ll++v+++g++ve++ ++l+l+W++ +Lvs+S
  ONIVA02G29390.1 623 DADSACKIERFLIQPRVHDMVLGRHKV-----HKAIAWRSVFAAAGFKPVPPSNLAEAQADCLLKRVQVRGFHVEKRGAALTLYWQRGELVSIS 711
                      99*******************988876.....56889********************************************************* PP

             GRAS 372 aWr 374
                      +Wr
  ONIVA02G29390.1 712 SWR 714
                      **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    
MRAALFGAER SGVVDLGGIG GGNRGLFWPA GKGGLVVVEP RSVLDCTRSP SPRNSTSTLS  60
SSQGGGGADS TGVAAVSESS AAAAEATKWG APGEHGGGGG GGGGGGKEDW SSGCELPPIP  120
GTLDVGLVGG EGWDTMLGNA AAAAAGQDQS FLNWIIGAAG DLEQPGPPLL DNAGFGIPAV  180
DPLGFSLDHS LSGVASDLSS SGAHTATGGA GGGKASLGFG LISPEATSLE QPPPPMLFHE  240
GIDTKPPLLG AQPPGLLNHY HHQPPNPAAT FFMPHPSFPE HNHQSPLLQP PPKRHHSMPD  300
DIYLARNQLP PAAAAAQGLP FSPLHASVPF QLQPSPPPTR GAMKTTAAEA AQQQLLDELA  360
AAAKATEAGN SVGAREILAR LNQQLPPLGK PFLRSASYLR EALLLALADS HHGVSSVTTP  420
LDVALKLAAY KSFSDLSPVL QFANFTATQA LLDEIGGTAT SCIHVIDFDL GVGGQWASFL  480
QELAHRRAAG GVTLPLLKLT AFVSTASHHP LELHLTQDNL SQFAADLGIP FEFNAVSLDA  540
FNPGELISST GDEVVAVSLP VGCSARAPPL PAILRLVKQL SPKIVVAIDH GADRADLSFS  600
QHFLNCFQSC VFLLDSLDAA GIDADSACKI ERFLIQPRVH DMVLGRHKVH KAIAWRSVFA  660
AAGFKPVPPS NLAEAQADCL LKRVQVRGFH VEKRGAALTL YWQRGELVSI SSWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-92GRAS family protein