PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G28990.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 225aa    MW: 23144.5 Da    PI: 5.0812
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G28990.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-184998255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      y+GVr ++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  ONIVA02G28990.1 49 TYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAALAIKG 98
                     69****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MDDSSFGSEP TTSSSGGEAP ASPPSTASSS SDGAGGKKKR PRKDGHHPTY RGVRMRSWGK  60
WVSEIREPRK KSRIWLGTFA TAEMAARAHD VAALAIKGRA AHLNFPDLAH ELPRPATAAP  120
KDVQAAAALA AAADFPASSA NAGASNNPDG SDDASAGSAS PPPPPDAADD ALFDLPDLLL  180
DLRYGPPSSG LSCASSWEDE VGLISGAGAA AAGVFRLEEP LLWEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.12e-39ERF family protein