PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G28960.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 293aa    MW: 29905.7 Da    PI: 4.8312
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G28960.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.6e-19103153155
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      + y+GVr+++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  ONIVA02G28960.1 103 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 153
                      57*****887.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MEAAAIHAPT TTTSSDSGSC VTNGTREKRE ISKHKQLKRK RSTSPAPPPG CGGGQGQEAA  60
VETDADAGAA GRGGGAGEEE SSSCGGAGAG EGERKRGDAG RHPSYRGVRR RSWGKWVSEI  120
REPRKKSRIW LGTFPTAEMA ARAHDVAALA IKGRAAHLNF PSLAHTLPRP ASTSPSDIQA  180
AAALAAAAAA TDQCESSSSA VAAATATDAE AAESTSSAAA SPCAATSSVE ENALFDLPDL  240
LLDLSDGLWC SPVWTTAPAD QYDAGDDGDD AAAPLLWAEQ CWMDAPAAPV QPD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.12e-42ERF family protein