PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G28840.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 345aa    MW: 36356.7 Da    PI: 5.7499
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G28840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-20154205256
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      +y+GVr+++ +g+++AeIrdp+++g   r++lg+++ta eAa+a+++a+ +++g+
  ONIVA02G28840.1 154 KYRGVRQRP-WGKFAAEIRDPKKRG--SRVWLGTYDTAIEAARAYDRAAFRMRGA 205
                      8********.***********8876..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MDFSGDIDDL ISLQLLHDQL LGVEADACLP VAVHHDGVAA FAEHQQGFHP AAFLPQQPMT  60
MTPAGYVDMA NDQYLGAHAA AGEAEAVYRA AAAEPVMIRF GGEVSPVSDP RRPPLTISLP  120
PTSHAWAAAE AVHPAALLQA QAAAAAADPN DFRKYRGVRQ RPWGKFAAEI RDPKKRGSRV  180
WLGTYDTAIE AARAYDRAAF RMRGAKAILN FPNEVGSRGA DFLAPPPPPP PPTTSTHGKR  240
KRHETAAADP DVEVIGESSK SVKTETYTSP ASSSLASTTT STVTSSSTSP SPSSEAAACG  300
GGGGGELFVP PMPSSWSWDQ LEGFFGILSP LSPHPQMGFP EVAVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.12e-22ERF family protein