PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G28610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 234aa MW: 25724.2 Da PI: 8.7066 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101 | 7.1e-32 | 159 | 217 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsY+rCt+++C+vkk+ver ++d ++v++tYeg+H+h+ ONIVA02G28610.1 159 LDDGYKWRKYGQKVVKNSLHPRSYFRCTHSNCRVKKRVERLSTDCRMVITTYEGRHTHS 217 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MEGGGQLGTC LPNFYLLPDH HGMPLPPPLQ LPCHPKLLQM PFDQEDQRGI HGVMLSSDHC 60 GLYPLPALPL SNSAAAAAAT VALGKHSAAA GSMPNIGGAE EVATTVTKAG NESTTCNGST 120 TWWRGSTMAA AGEKGKMKIR RKMREPRFCF QTRSEVDVLD DGYKWRKYGQ KVVKNSLHPR 180 SYFRCTHSNC RVKKRVERLS TDCRMVITTY EGRHTHSPCD DNSSGEHTNC FSSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44745.1 | 4e-62 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G28610.1 |