PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G28150.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 372aa MW: 41313.3 Da PI: 6.9409

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G28150.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.8	7e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 +ppGfrFhPtdeelv++yL+kkv++kk++l +vik+vd+yk+ePwdL++ k+ e+++wyfFs++dkky+tg+r+nrat +g+Wkatg+dk+ ONIVA02G28150.1 7 VPPGFRFHPTDEELVDYYLRKKVASKKIDL-DVIKDVDLYKIEPWDLQEkcKIGMeEQNDWYFFSHKDKKYPTGTRTNRATGAGFWKATGRDKP 99 69**************************.9***********952433333556******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +++ ++ lvg++ktLvfykgrap+g+k+dW+mheyrle ONIVA02G28150.1 100 IYA-RSCLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 .999****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MDTFSHVPPG FRFHPTDEEL VDYYLRKKVA SKKIDLDVIK DVDLYKIEPW DLQEKCKIGM 60 EEQNDWYFFS HKDKKYPTGT RTNRATGAGF WKATGRDKPI YARSCLVGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETNEN GTTPEEGWVV CRVFKKRVAT VRRMADGSPC WFDDHGAVGA 180 FMPDLSSPRQ LLPHHHHHHP GSSAALYHGH HHQQLQQMYG HCKPELEYHH VLPQEAFLQH 240 LPQLESPKPP PPPPAAAAYI GGHLGSSSST ALTTHDDEAS GSAAQQQPPS LEAVYMAGAG 300 VGVGIGVDAS VTDWRLLDKF VASQLLSKES MSSYGSHPAQ VFQAADGGKH EEALDYASTS 360 AGSGGGEADL WK

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MDTFSHVPPG FRFHPTDEEL VDYYLRKKVA SKKIDLDVIK DVDLYKIEPW DLQEKCKIGM  60
EEQNDWYFFS HKDKKYPTGT RTNRATGAGF WKATGRDKPI YARSCLVGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETNEN GTTPEEGWVV CRVFKKRVAT VRRMADGSPC WFDDHGAVGA  180
FMPDLSSPRQ LLPHHHHHHP GSSAALYHGH HHQQLQQMYG HCKPELEYHH VLPQEAFLQH  240
LPQLESPKPP PPPPAAAAYI GGHLGSSSST ALTTHDDEAS GSAAQQQPPS LEAVYMAGAG  300
VGVGIGVDAS VTDWRLLDKF VASQLLSKES MSSYGSHPAQ VFQAADGGKH EEALDYASTS  360
AGSGGGEADL WK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	7e-90	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G28150.1