PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G25300.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | NAC | ||||||||
Protein Properties | Length: 380aa MW: 42228.3 Da PI: 5.8549 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 97.4 | 2.1e-30 | 57 | 200 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra....... 77 lp+G++F+P+d el+ e+L++k+ + +e+i+++d i++++P++Lp +k++ ++ +fF++ +++y g+rk+r+ ONIVA02G25300.2 57 LPAGVKFDPSDLELL-EHLEQKIGLGGskphtfI--DEFIPTIDndegICYSHPENLP-GMKKDGTSGHFFHRVSNAYGCGQRKRRKisncdhv 146 799************.99****876654555332..233444433445**********.677888999******************87899998 PP NAM 78 ..tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +++ +W++tgk+k++++ kg ++g kk++v+y ++r k+ k++Wvmh+y+l ONIVA02G25300.2 147 vsVEHVRWHKTGKSKAIVE-KGVTKGWKKIMVLYksSQRGAKPDKANWVMHQYHL 200 887899*************.999***********4435777888*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence |
MARSWLITGR GVAKKIRNAP HCSSRPISEL GAEAQMECPN CKHVIDNSDV AIQWPGLPAG 60 VKFDPSDLEL LEHLEQKIGL GGSKPHTFID EFIPTIDNDE GICYSHPENL PGMKKDGTSG 120 HFFHRVSNAY GCGQRKRRKI SNCDHVVSVE HVRWHKTGKS KAIVEKGVTK GWKKIMVLYK 180 SSQRGAKPDK ANWVMHQYHL GAEEDEKDGE LVVSKISYQL HGKQIDKFET GNADEESDAF 240 AARVGPKTPK SNTPQPCRLK NSPCETENYD PILEDQDDAG NPAWCAGETQ AAREAVQACP 300 NLDESLRCHE VLDSFYHETL LPSDRPILSQ GGNEILDRNL NAVYGLPDLY NVDLGTPPDF 360 QLADLQFGSQ ESFGNWLDSI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 135 | 161 | RKRRKISNCDHVVSVEHVRWHKTGKSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01600.1 | 8e-92 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G25300.2 |