PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G25300.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 393aa MW: 43682.9 Da PI: 5.4359

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G25300.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	97.3	2.3e-30	57	200	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra....... 77 lp+G++F+P+d el+ e+L++k+ + +e+i+++d i++++P++Lp +k++ ++ +fF++ +++y g+rk+r+ ONIVA02G25300.1 57 LPAGVKFDPSDLELL-EHLEQKIGLGGskphtfI--DEFIPTIDndegICYSHPENLP-GMKKDGTSGHFFHRVSNAYGCGQRKRRKisncdhv 146 799**********.99876654555332..233444433445******.677888999**************87899998 PP NAM 78 ..tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +++ +W++tgk+k++++ kg ++g kk++v+y ++r k+ k++Wvmh+y+l ONIVA02G25300.1 147 vsVEHVRWHKTGKSKAIVE-KGVTKGWKKIMVLYksSQRGAKPDKANWVMHQYHL 200 887899*********.999*******4435777888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MARSWLITGR GVAKKIRNAP HCSSRPISEL GAEAQMECPN CKHVIDNSDV AIQWPGLPAG 60 VKFDPSDLEL LEHLEQKIGL GGSKPHTFID EFIPTIDNDE GICYSHPENL PGMKKDGTSG 120 HFFHRVSNAY GCGQRKRRKI SNCDHVVSVE HVRWHKTGKS KAIVEKGVTK GWKKIMVLYK 180 SSQRGAKPDK ANWVMHQYHL GAEEDEKDGE LVVSKISYQL HGKQIDKFET GNADEESDAF 240 AARVGPKTPK SNTPQPCRLK NSPCETENYD PILEDQDEEE SNIPIVSLKD DAGNPAWCAG 300 ETQAAREAVQ ACPNLDESLR CHEVLDSFYH ETLLPSDRPI LSQGGNEILD RNLNAVYGLP 360 DLYNVDLGTP PDFQLADLQF GSQESFGNWL DSI

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MARSWLITGR GVAKKIRNAP HCSSRPISEL GAEAQMECPN CKHVIDNSDV AIQWPGLPAG  60
VKFDPSDLEL LEHLEQKIGL GGSKPHTFID EFIPTIDNDE GICYSHPENL PGMKKDGTSG  120
HFFHRVSNAY GCGQRKRRKI SNCDHVVSVE HVRWHKTGKS KAIVEKGVTK GWKKIMVLYK  180
SSQRGAKPDK ANWVMHQYHL GAEEDEKDGE LVVSKISYQL HGKQIDKFET GNADEESDAF  240
AARVGPKTPK SNTPQPCRLK NSPCETENYD PILEDQDEEE SNIPIVSLKD DAGNPAWCAG  300
ETQAAREAVQ ACPNLDESLR CHEVLDSFYH ETLLPSDRPI LSQGGNEILD RNLNAVYGLP  360
DLYNVDLGTP PDFQLADLQF GSQESFGNWL DSI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	161	RKRRKISNCDHVVSVEHVRWHKTGKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	3e-90	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G25300.1