PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G25260.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 339aa    MW: 35337.9 Da    PI: 7.5738
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G25260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.6e-1751101155
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      ++y+GVr+++ +gr++AeIrdp     +  r +lg+f+tae+Aa a++ a+++++g
  ONIVA02G25260.1  51 TRYRGVRRRP-WGRFAAEIRDPA----SkERRWLGTFDTAEQAACAYDVAARAMRG 101
                      68********.**********83....25999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MDEPANAQLY GHAHAHSHHH RSKRPSPGGG GGGAASLGAD GGGGGGSLSG TRYRGVRRRP  60
WGRFAAEIRD PASKERRWLG TFDTAEQAAC AYDVAARAMR GTRARTNFPV PAAAGFPGGG  120
SGGCWPWVNI PPQGAAAAAS HQQPLNTFLL HNLLMSSSPH GCLLLHHAGH GHGHAHSHSH  180
SHSRAHNPST RPPTSAPPPP PPAAASSATT APATTTGAAA TSAPGADDDA WGFLLRREPP  240
EAGLLQDVLH GFYPTRRPHD DAGPAPKLER PYEATSSYRV SSPWGAVEDC DDGDGDGDDD  300
YRGFPMMPQG LLEDVIQCPP YMEVLAAPSA AVGRVSRRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12980.11e-12ERF family protein