PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G23130.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HD-ZIP

Protein Properties

Length: 349aa MW: 37437.6 Da PI: 5.7163

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G23130.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.3	2.6e-18	152	206	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Le+ F+++++++ +++ +LA++l+L rqV vWFqNrRa+ k ONIVA02G23130.1 152 RKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTK 206 788899***********************************************98 PP
2	HD-ZIP_I/II	126.2	1.5e-40	152	243	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LE+sF+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL++ev+eLr +l+ ONIVA02G23130.1 152 RKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGALR 243 69**************************************************************************************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MELELSLGDS PAPVKATIAP TPVLIPTCMG DEEDLELVLG VRATRRDEQD DQTTCTQSSE 60 EAMEGEEDET RPHGEAPVES LSFPLFVSSA ETGSANSEMC TRGFDVNTRP ADGGAEAGRP 120 SSPSSMQEAS TRQQVADQEA ADDEDNGGGG ARKKLRLSKE QSSFLEDSFK EHSTLTPKQK 180 SDLANRLNLR PRQVEVWFQN RRARTKLKQT EVDCEHLKRC CERLTRENRR LQREVAELRG 240 ALRTTTSSYP PLYGLHHLPA AAGTVFRVCP SCEHSKVVAA AASESFSPRV FAGGGAPAAI 300 TATAAVPSPG AGSPPSSSAA LFGARRPHFG PFAAAVIPPV LRRQPSATS

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MELELSLGDS PAPVKATIAP TPVLIPTCMG DEEDLELVLG VRATRRDEQD DQTTCTQSSE  60
EAMEGEEDET RPHGEAPVES LSFPLFVSSA ETGSANSEMC TRGFDVNTRP ADGGAEAGRP  120
SSPSSMQEAS TRQQVADQEA ADDEDNGGGG ARKKLRLSKE QSSFLEDSFK EHSTLTPKQK  180
SDLANRLNLR PRQVEVWFQN RRARTKLKQT EVDCEHLKRC CERLTRENRR LQREVAELRG  240
ALRTTTSSYP PLYGLHHLPA AAGTVFRVCP SCEHSKVVAA AASESFSPRV FAGGGAPAAI  300
TATAAVPSPG AGSPPSSSAA LFGARRPHFG PFAAAVIPPV LRRQPSATS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	201	209	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	7e-53	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G23130.1