PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G22590.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

ARF

Protein Properties

Length: 679aa MW: 74818.1 Da PI: 6.3001

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G22590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.4	2.7e-23	129	229	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++ +++aee+ ++++ + +l+ +d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + ONIVA02G22590.1 129 FCKTLTASDTSTHGGFSVLRRHAEEClppldmtQNPPWQ--ELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RG 218 99**************************986555545..8********************************************..44 PP SEE..EEEEE- CS B3 88 sefelvvkvfr 98 +++el+v+v+r ONIVA02G22590.1 219 ENGELRVGVRR 229 9999***97 PP
2	Auxin_resp	111.4	9e-37	255	337	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+st++ F+v+Y+Pr+s+seFvv+++k+++a ++k+svGmRfkm+fe+++++err+sGt++gv ++++ W nS WrsLk ONIVA02G22590.1 255 ASHAISTGTLFSVFYKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERRFSGTIIGVGSMSTSPWANSDWRSLK 337 789******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MAGSVVAAAA AAGGGGTGSS CDALYRELWH ACAGPLVTVP RQGELVYYFP QGHMEQLEAS 60 TDQQLDQHLP LFNLPSKILC KVVNVELRAE TDSDEVYAQI MLQPEADQNE LTSPKPEPHE 120 PEKCNVHSFC KTLTASDTST HGGFSVLRRH AEECLPPLDM TQNPPWQELV ARDLHGNEWH 180 FRHIFRGQPR RHLLTTGWSV FVSSKRLVAG DAFIFLRGEN GELRVGVRRL MRQLNNMPSS 240 VISSHSMHLG VLATASHAIS TGTLFSVFYK PRTSQSEFVV SANKYLEAKN SKISVGMRFK 300 MRFEGDEAPE RRFSGTIIGV GSMSTSPWAN SDWRSLKVQW DEPSVVPRPD RVSPWELEPL 360 AVSNSQPSPQ PPARNKRARP PASSSIAPEL PPVFGLWKSS AESTQGFSFS GLQRTQELYP 420 SSPNPIFSTS LNVGFSTKNE PSALSNKHFY WPMRETRADS YSASISKVPS EKKQEPSSAG 480 CRLFGIEISS AVEATSPLAA VSGVGQDQPA ASVDAESDQL SQPSHANKSD APAASSEPSP 540 HETQSRQVRS CTKVIMQGMA VGRAVDLTRL HGYDDLRCKL EEMFDIQGEL SASLKKWKVV 600 YTDDEDDMML VGDDPWPEFC SMVKRIYIYT YEEAKQLTPK SKLPIIGDAI KPNPNKQSPE 660 SDMPHSDLDS TAPVTDKDC

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MAGSVVAAAA AAGGGGTGSS CDALYRELWH ACAGPLVTVP RQGELVYYFP QGHMEQLEAS  60
TDQQLDQHLP LFNLPSKILC KVVNVELRAE TDSDEVYAQI MLQPEADQNE LTSPKPEPHE  120
PEKCNVHSFC KTLTASDTST HGGFSVLRRH AEECLPPLDM TQNPPWQELV ARDLHGNEWH  180
FRHIFRGQPR RHLLTTGWSV FVSSKRLVAG DAFIFLRGEN GELRVGVRRL MRQLNNMPSS  240
VISSHSMHLG VLATASHAIS TGTLFSVFYK PRTSQSEFVV SANKYLEAKN SKISVGMRFK  300
MRFEGDEAPE RRFSGTIIGV GSMSTSPWAN SDWRSLKVQW DEPSVVPRPD RVSPWELEPL  360
AVSNSQPSPQ PPARNKRARP PASSSIAPEL PPVFGLWKSS AESTQGFSFS GLQRTQELYP  420
SSPNPIFSTS LNVGFSTKNE PSALSNKHFY WPMRETRADS YSASISKVPS EKKQEPSSAG  480
CRLFGIEISS AVEATSPLAA VSGVGQDQPA ASVDAESDQL SQPSHANKSD APAASSEPSP  540
HETQSRQVRS CTKVIMQGMA VGRAVDLTRL HGYDDLRCKL EEMFDIQGEL SASLKKWKVV  600
YTDDEDDMML VGDDPWPEFC SMVKRIYIYT YEEAKQLTPK SKLPIIGDAI KPNPNKQSPE  660
SDMPHSDLDS TAPVTDKDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G22590.1