PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | ONIVA02G21500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 458aa MW: 48961.7 Da PI: 4.9148 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 85 | 5.8e-27 | 151 | 216 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++++gi++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn+irwkg ONIVA02G21500.1 151 RYDSSLGLLTKKFINLLKQAPDGILDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKTLKNRIRWKG 216 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 458 aa Download sequence |
MAGSGRPPAA QKKILQSLRP PLPFAASSRS PFAAPNDYHR FPSGGAAAAA ASGSGGIGAG 60 GAGGGGGDIE EGLVIRTPQK RKAPEESDVA ESSDCMITSP GFTVSPMLTP VSGKAVKTSK 120 SKTKNNKAGP QTPTSNVGSP LNPPTPVGTC RYDSSLGLLT KKFINLLKQA PDGILDLNNA 180 AETLEVQKRR IYDITNVLEG IGLIEKTLKN RIRWKGLDDS GVELDNGLSA LQAEVENLSL 240 KEQALDERIR WLYVTEDDIK GLPCFQNETL IAIKAPHGTT LEVPDPDEAG DYLQRRYRIV 300 LRSTMGPIDV YLVSQFDEKF EDLGGGATPS GHANVPKHQP TEVFNTTNAG VGQCSNSVAV 360 DNNIQHSQTI PQDPSASHDF GGMTRIIPSD IDTDADYWLI SEGDVSITDM WKTAHVQWDE 420 GLDTDVFLSE DVRTPSSHNQ QPSAVGGPQM QVSDMHKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G36010.1 | 1e-113 | E2F/DP family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | ONIVA02G21500.1 |