PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G20490.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 260aa    MW: 26408.7 Da    PI: 10.3516
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G20490.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.6e-2086135255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr+++ +g+W+AeIrdp   + + +r++lg+f+tae Aa+a++ a+++++g
  ONIVA02G20490.1  86 HYRGVRRRP-WGKWAAEIRDP---N-KaARVWLGTFDTAEAAAAAYDDAALRFKG 135
                      7********.**********9...3.35************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MSSRQPIGSG GGGAPPDWHD VEPQWQPVDD VVTVAAAAAY LAAPAGATLS SESADRRWRP  60
VGPSAAAAAA ALQAVEAQGA AAAERHYRGV RRRPWGKWAA EIRDPNKAAR VWLGTFDTAE  120
AAAAAYDDAA LRFKGAKAKL NFPERVRGRT GQGGFLVSPA VPRPPPHGVP APAPAVAPAP  180
FPDLIQYARL LRSGEDAAAA AAVAGIAATA APAAQILDFA AQRLVGVSPA MAPRPPSTLP  240
TTTTAASSPS AWPHGGGHGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.13e-26ERF family protein