PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G17190.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 292aa    MW: 32041.7 Da    PI: 7.9981
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G17190.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.21.9e-1529126193
                      EEEE-..-HHHHT.T-EE--HHH.HTT......---..--SEEEEEE..TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
               B3   1 ffkvltpsdvlks.grlvlpkkfaeeh......ggkkeesktltled..esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                      f kvl+psdv+    +lv+p +++ +       + ++ + + +++ed   +g+ W +++  +k+++ + ltkGW  +++++gL++gD+v F+  
  ONIVA02G17190.1  29 FGKVLMPSDVSWDtEQLVIPDEHVGKLldmvvmNRPEGGFFVVVVEDgeVTGKLWLFRY--WKRDDVHCLTKGWGCYAREKGLRAGDTVSFH-- 118
                      6799******977699********9999999976666667777888866677*******..******************************9.. PP

                      SSSEE..E CS
               B3  86 grsefelv 93 
                      ++ +++++
  ONIVA02G17190.1 119 STACGRFF 126
                      44555444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MAASPPLPTS IDGGQVLDDM EVVEMKYLFG KVLMPSDVSW DTEQLVIPDE HVGKLLDMVV  60
MNRPEGGFFV VVVEDGEVTG KLWLFRYWKR DDVHCLTKGW GCYAREKGLR AGDTVSFHST  120
ACGRFFICCR CTCMSFLSLP TTSHRIHGSS VLPQPRAAQA AHHPFSGHAT LCLGNKASDH  180
SAPARHATAS LGCAAAQPRQ VPPTPTPRRR RRSMMVHPEP PEHTTDGMPV ILESMALVST  240
PPVAKRVRLF GVYIDVPPLR PGGEATQDFN HDDGVPSVDR NALKRRRAAA DN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.12e-12B3 family protein