PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G13200.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB_related | ||||||||
Protein Properties | Length: 475aa MW: 51906 Da PI: 6.0021 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33 | 1.4e-10 | 78 | 120 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++W+ eE+++l+++ + +G++ W + a+++ gRt +k++w+ ONIVA02G13200.2 78 KQAWSREEELRLIHVQQIFGNK-WCRMAEHFT-GRTSAAIKEHWR 120 799*******************.********9.***********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 475 aa Download sequence |
MASRAVEGEG EGEEEGEGKG NLANAPEDSH KHCQGEELEA GQSCKINYQD IMDKCGIEIS 60 EKRRRRWWKF NLDPAISKQA WSREEELRLI HVQQIFGNKW CRMAEHFTGR TSAAIKEHWR 120 GPMKRKLNSY LASGLLKKSP GLPENLSVSQ SSDSNILQQC DVSSDENKLL SDLRPSLKSK 180 EGVSSKCDGS SGDNQLLSDL RASLKSKGAS SKCDGSSGDN QLLSDLRASL KSKGASSKCD 240 GSSDENKLLS DLRACLKSKQ GASSKCDGSS GENQLLSDLQ ASLMSKQRTS SKYKQGASSK 300 SKQGTSSKSK QGFIDLCENT DTSEGESSEL ICTERPDPDS GEASQRIRDR LNWRKRARKK 360 LVFLSSPVEL KVSAVAESER HLQESKEMSP EVNIVSPPAV LQGFSPEVPS VCEKIVEPPL 420 ADFNQAKNVC SLETSSDPCT LEQHLANVSD LLDMSYIDGL MIIPPAGCPY DGDFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11510.1 | 5e-20 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G13200.2 |