PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G12010.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 364aa MW: 39919.3 Da PI: 6.9956

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G12010.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.3	1e-51	10	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+e+d++k+ePwdL+ ++ + ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+ ONIVA02G12010.1 10 VPPGFRFHPTDEELLYYYLRKKVAYEAIDL-DVIREIDLNKLEPWDLKDrcRIGTgPQEEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKA 102 69**************************.9***********943444442456******************************* PP NAM 92 vlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g+ +gl+ktLvfy+grap+g+ktdW+mheyrl ONIVA02G12010.1 103 IFLGggGGTRIGLRKTLVFYTGRAPHGKKTDWIMHEYRL 141 8777888**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MHPNGAPLAV PPGFRFHPTD EELLYYYLRK KVAYEAIDLD VIREIDLNKL EPWDLKDRCR 60 IGTGPQEEWY FFSHKDKKYP TGTRTNRATA AGFWKATGRD KAIFLGGGGG TRIGLRKTLV 120 FYTGRAPHGK KTDWIMHEYR LDDDNVDVPE EGWVVCRVFK KKSIHQRGFD QPDMAAAADE 180 DELRYQLLHG VGMSSSPVDQ KHVLLQEQLV AHGAHGGGFV VPAFDASMHL PQLASADAAP 240 CGGGGGGGHV AFASMNPLDA AGCGSQNMMT MKMAATSGGE MLLMRSGGVD GGRFGAAADW 300 SILDKLLASH QNLDQLFHGK VAGAHQQQQQ QQQQMAMDAA SSLQRLPFHH YLGLEAADLL 360 KFSM

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MHPNGAPLAV PPGFRFHPTD EELLYYYLRK KVAYEAIDLD VIREIDLNKL EPWDLKDRCR  60
IGTGPQEEWY FFSHKDKKYP TGTRTNRATA AGFWKATGRD KAIFLGGGGG TRIGLRKTLV  120
FYTGRAPHGK KTDWIMHEYR LDDDNVDVPE EGWVVCRVFK KKSIHQRGFD QPDMAAAADE  180
DELRYQLLHG VGMSSSPVDQ KHVLLQEQLV AHGAHGGGFV VPAFDASMHL PQLASADAAP  240
CGGGGGGGHV AFASMNPLDA AGCGSQNMMT MKMAATSGGE MLLMRSGGVD GGRFGAAADW  300
SILDKLLASH QNLDQLFHGK VAGAHQQQQQ QQQQMAMDAA SSLQRLPFHH YLGLEAADLL  360
KFSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79580.1	3e-87	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G12010.1