PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G11280.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 547aa MW: 59184.4 Da PI: 6.3627

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G11280.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.8	1.9e-31	118	171	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ ONIVA02G11280.1 118 PRLRWTPDLHMAFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 171 8****************************************************7 PP
2	Myb_DNA-binding	47.9	3.2e-15	119	170	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg t+k++ ++m+ g++ ++ks++q+y+ ONIVA02G11280.1 119 RLRWTPDLHMAFVHAVERLGGQeraTPKLVLQMMNvRGLSIAHVKSHLQMYR 170 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MKEKEVLVEI VEDDELKRSI GRNQLDLNEE VMDVESEEGE VGDDEDDEDE EDDDDDDDGG 60 STTDVAGSRS SSNNSSTNNV SESKLKGDKD SGGGRLEGIN GGEQRVPSVR QYNRSKLPRL 120 RWTPDLHMAF VHAVERLGGQ ERATPKLVLQ MMNVRGLSIA HVKSHLQMYR SKKLDHEGRQ 180 IRGAIASVFS PMDFHLMRGD RRFHDMLLQR AAALSSSRQE HGGFFSSRSG GGGGGLPPEA 240 SRLYGLLQHR QSPAIATMQT FDFKNSSFRN QEWSFSFNHQ RKETMNPSSS SSTTAAIRRW 300 PSAAGTVAVV AGERQRLAER FGYYTGNGGA SSTSLPLITR AAMAAPPPMF AAAVAPPGRD 360 HHRLPFGWHA GGGGGGGGGG NKNRSSSDPV VIDEALDSRR LEHQQKHVEQ PRMTPTTTTT 420 PAGKRPPEWS PPDLQLTLSP TTAPAAADRG GAKRSKTSTT TTNTTAAISG EQEAEKNMDR 480 CKNKLSISLS LSPPAAAAAA ANFSSMDLSM EQQKQKQEKT TIGSSEEEAG DLGQSTLDLT 540 MSIRALE

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MKEKEVLVEI VEDDELKRSI GRNQLDLNEE VMDVESEEGE VGDDEDDEDE EDDDDDDDGG  60
STTDVAGSRS SSNNSSTNNV SESKLKGDKD SGGGRLEGIN GGEQRVPSVR QYNRSKLPRL  120
RWTPDLHMAF VHAVERLGGQ ERATPKLVLQ MMNVRGLSIA HVKSHLQMYR SKKLDHEGRQ  180
IRGAIASVFS PMDFHLMRGD RRFHDMLLQR AAALSSSRQE HGGFFSSRSG GGGGGLPPEA  240
SRLYGLLQHR QSPAIATMQT FDFKNSSFRN QEWSFSFNHQ RKETMNPSSS SSTTAAIRRW  300
PSAAGTVAVV AGERQRLAER FGYYTGNGGA SSTSLPLITR AAMAAPPPMF AAAVAPPGRD  360
HHRLPFGWHA GGGGGGGGGG NKNRSSSDPV VIDEALDSRR LEHQQKHVEQ PRMTPTTTTT  420
PAGKRPPEWS PPDLQLTLSP TTAPAAADRG GAKRSKTSTT TTNTTAAISG EQEAEKNMDR  480
CKNKLSISLS LSPPAAAAAA ANFSSMDLSM EQQKQKQEKT TIGSSEEEAG DLGQSTLDLT  540
MSIRALE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-34	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G11280.1