PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G09840.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | NAC | ||||||||
Protein Properties | Length: 252aa MW: 28248.6 Da PI: 4.9419 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 115.7 | 4.6e-36 | 12 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 +ppGfrF+Ptde+lvv+yL+++++++++ + i+++d+y+v+Pw+Lp +++++++++ yfF+ +++++ +++r+t sg+Wk t ++k+++ ONIVA02G09840.1 12 MPPGFRFQPTDEQLVVDYLQRRTAAQPCVT-PDITDIDVYNVDPWQLPaMAMYGSDHDRYFFTMAAREA----QARRTTPSGFWKPTSTKKTIF 100 79*************************988.55***************778888999*******99875....7899****************9 PP NAM 94 sk...kgelvglkktLvfy......kgrapkgektdWvmheyrl 128 + ++ + +k+ +vfy +g++ + +kt+W+mheyrl ONIVA02G09840.1 101 VVaggHEVPTAVKRRFVFYlghhqpSGSN-NNNKTSWIMHEYRL 143 9976666669*********6554433333.346*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MAMTPQLAFS RMPPGFRFQP TDEQLVVDYL QRRTAAQPCV TPDITDIDVY NVDPWQLPAM 60 AMYGSDHDRY FFTMAAREAQ ARRTTPSGFW KPTSTKKTIF VVAGGHEVPT AVKRRFVFYL 120 GHHQPSGSNN NNKTSWIMHE YRLMNSPRAA VPSSSSVNRL PTDDLTEEMV LCRISNKDLP 180 KPPFIHNGLL QFSSVGLNGD GYNYLILDHL EPPAMEYPNV DIGNVDDAAA ADDDPGDLDE 240 EIDDSMQRNH GG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 3e-33 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G09840.1 |