PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G06380.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 329aa    MW: 35204.6 Da    PI: 6.0615
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G06380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.82.7e-15109160155
                      CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +r++h ++Er+RR+++N+ ++ Lr+l+P +   +s++ + a+i+  A++Y+k+L+
  ONIVA02G06380.1 109 QRMTHIAVERNRRRQMNEYLAVLRSLMPAS---YSQRGDQASIVGGAINYVKELE 160
                      79****************************...*******************996 PP

Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MALEAVVFPQ GHFGYGCGRD SPAYGMPWCD VLAAAGGGGG FGEFYGVDEW DDQLQVASVD  60
EWEVASKDNS DASTEGKAAA AERAAPVAAG RRKRRRTKVV KNKEEIECQR MTHIAVERNR  120
RRQMNEYLAV LRSLMPASYS QRGDQASIVG GAINYVKELE QLLQSLEVQK SLKNRSGAMD  180
AAGDSPFAGF FSFPQYSTSP RTGCSAAASA GSSGSASSVV MDDTAGSAES GRQSAAIADI  240
EVTMVEGHAS LKVLARRRPK QLLKLVVGLQ QLRIPPLHLN VTTVDAMVLY SFSLKVEDDS  300
KLGSVEDIAT AVHQILGSIQ QQEAVLSIS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19296RKRRR
29297RKRRRT
3110121RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.13e-59bHLH family protein