PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G06230.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CAMTA

Protein Properties

Length: 1035aa MW: 116220 Da PI: 5.8541

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G06230.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176.7	3e-55	20	136	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 ke ++rwl+++ei++iL+n+++++++ e+++rp+sgsl+L++rk++ryfrkDG++w+kk+dgktv+E+he+LK g+++vl+cyYah+een +fq ONIVA02G06230.1 20 KEaQRRWLRPTEICEILKNYRSFRIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKRDGKTVKEAHERLKSGSIDVLHCYYAHGEENINFQ 113 55599*************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylevk 118 rr+yw+Lee++ +ivlvhylevk ONIVA02G06230.1 114 RRSYWMLEEDYMHIVLVHYLEVK 136 ******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1035 aa Download sequence
MAEGRRYAIA PQLDIEQILK EAQRRWLRPT EICEILKNYR SFRIAPEPPN RPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKRD GKTVKEAHER LKSGSIDVLH CYYAHGEENI NFQRRSYWML 120 EEDYMHIVLV HYLEVKLKFH FLHIYGYDHQ AGKLSSRSTG HDDVLQVSHA DSPLSQLPSQ 180 TTEGESSVSG QASEYDETES AYLKQNSVQQ IFIREEPDTT LSLGCGSMKM EVDLYQGLQA 240 TAPNTGFYSH GQDNLPVVLN ESDLGTAFNG PNSQFDLSLW IEAMKPDKGT HQIPLYQAPV 300 PSEQSPFTGG PGIESFTFDE VYNNGLSIKD VDGDDTDGET PWQIPNASGT FATADSFQQN 360 DKTLEEAINY PLLKTQSSSL SDIIKDSFKK NDSFTRWMSK ELAEVDDSQI TSSSGVYWNS 420 EEADNIIEAS SSDQYTLGPV LAQDQLFTIV DFSPTWTYAG SKTRVFIKGN FLSSDEVKRL 480 KWSCMFGEFE VPAEIIADDT LVCHSPSHKP GRVPFYVTCS NRLACSEVRE FDFRPQYMDA 540 PSPLGSTNKI YLQKRLDKLL SVEQDEIQTT LSNPTKEIID LSKKISSLMM NNDDWSELLK 600 LADDNEPATD DKQDQFLQNR IKEKLHIWLL HKVGDGGKGP SMLDEEGQGV LHLAAALGYD 660 WAIRPTIAAG VNINFRDAHG WTALHWAAFC GRERTVVALI ALGAAPGAVT DPTPSFPSGS 720 TPADLASANG HKGISGFLAE SSLTSHLQTL NLKEAMRSSA GEISGLPGIV NVADRSASPL 780 AVEGHQTGSM GDSLGAVRNA AQAAARIYQV FRMQSFQRKQ AVQYEDENGA ISDERAMSLL 840 SAKPSKPAQL DPLHAAATRI QNKFRGWKGR KEFLLIRQRI VKIQAHVRGH QVRKHYRKII 900 WSVGIVEKVI LRWRRRGAGL RGFRPTENAV TESTSSSSGN VTQNRPAEND YDFLQEGRKQ 960 TEERLQKALA RVKSMVQYPD ARDQYQRILT VVTKMQESQA MQEKMLEEST EMDEGLLMSE 1020 FKELWDDDMP TPGYF

Sequence ? help Back to Top

Protein Sequence Length: 1035 aa Download sequence

MAEGRRYAIA PQLDIEQILK EAQRRWLRPT EICEILKNYR SFRIAPEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKRD GKTVKEAHER LKSGSIDVLH CYYAHGEENI NFQRRSYWML  120
EEDYMHIVLV HYLEVKLKFH FLHIYGYDHQ AGKLSSRSTG HDDVLQVSHA DSPLSQLPSQ  180
TTEGESSVSG QASEYDETES AYLKQNSVQQ IFIREEPDTT LSLGCGSMKM EVDLYQGLQA  240
TAPNTGFYSH GQDNLPVVLN ESDLGTAFNG PNSQFDLSLW IEAMKPDKGT HQIPLYQAPV  300
PSEQSPFTGG PGIESFTFDE VYNNGLSIKD VDGDDTDGET PWQIPNASGT FATADSFQQN  360
DKTLEEAINY PLLKTQSSSL SDIIKDSFKK NDSFTRWMSK ELAEVDDSQI TSSSGVYWNS  420
EEADNIIEAS SSDQYTLGPV LAQDQLFTIV DFSPTWTYAG SKTRVFIKGN FLSSDEVKRL  480
KWSCMFGEFE VPAEIIADDT LVCHSPSHKP GRVPFYVTCS NRLACSEVRE FDFRPQYMDA  540
PSPLGSTNKI YLQKRLDKLL SVEQDEIQTT LSNPTKEIID LSKKISSLMM NNDDWSELLK  600
LADDNEPATD DKQDQFLQNR IKEKLHIWLL HKVGDGGKGP SMLDEEGQGV LHLAAALGYD  660
WAIRPTIAAG VNINFRDAHG WTALHWAAFC GRERTVVALI ALGAAPGAVT DPTPSFPSGS  720
TPADLASANG HKGISGFLAE SSLTSHLQTL NLKEAMRSSA GEISGLPGIV NVADRSASPL  780
AVEGHQTGSM GDSLGAVRNA AQAAARIYQV FRMQSFQRKQ AVQYEDENGA ISDERAMSLL  840
SAKPSKPAQL DPLHAAATRI QNKFRGWKGR KEFLLIRQRI VKIQAHVRGH QVRKHYRKII  900
WSVGIVEKVI LRWRRRGAGL RGFRPTENAV TESTSSSSGN VTQNRPAEND YDFLQEGRKQ  960
TEERLQKALA RVKSMVQYPD ARDQYQRILT VVTKMQESQA MQEKMLEEST EMDEGLLMSE  1020
FKELWDDDMP TPGYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G06230.1