PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G05950.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 383aa MW: 40279.5 Da PI: 7.697

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G05950.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.2e-33	44	98	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl ONIVA02G05950.1 44 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 98 79****************************************************8 PP
2	Myb_DNA-binding	72.4	6.9e-23	46	97	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ ONIVA02G05950.1 46 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 97 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MFPGSKKGGG GGAAVSSGDG GGGRAAAAMC VQGDSGLVLT TDPKPRLRWT VELHERFVDA 60 VTQLGGPDKA TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFSEHS VKEAAAMEMQ 120 RNAASSSGIM GRSMNHDRNV NDAIRMQMEV QRRLHEQLEV QKHLQMRIEA QGKYMQSILE 180 KAYQTLAAGD VAAAVACGPA GYKSLGNHQA AVLDVCSMGF PSLQDLHMYG GAGGGHLDLQ 240 QQQPPASTME SFFACGDGGG SLGKTAAKTR HYGGAGKSPM MWGVDDDDDD DDPAGKCGGG 300 GHHQLQMAPP PMMDGGIDVM DSLAADVYET KPIMSGDSTG SKGGGYDVAA AASKLERPSP 360 RRPPQLGSPS VMAGAQTRNL SYG

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MFPGSKKGGG GGAAVSSGDG GGGRAAAAMC VQGDSGLVLT TDPKPRLRWT VELHERFVDA  60
VTQLGGPDKA TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFSEHS VKEAAAMEMQ  120
RNAASSSGIM GRSMNHDRNV NDAIRMQMEV QRRLHEQLEV QKHLQMRIEA QGKYMQSILE  180
KAYQTLAAGD VAAAVACGPA GYKSLGNHQA AVLDVCSMGF PSLQDLHMYG GAGGGHLDLQ  240
QQQPPASTME SFFACGDGGG SLGKTAAKTR HYGGAGKSPM MWGVDDDDDD DDPAGKCGGG  300
GHHQLQMAPP PMMDGGIDVM DSLAADVYET KPIMSGDSTG SKGGGYDVAA AASKLERPSP  360
RRPPQLGSPS VMAGAQTRNL SYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	3e-95	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G05950.1