PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G03520.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 589aa MW: 63857.6 Da PI: 8.1674

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G03520.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.8	1.2e-08	4	52	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48 +WTt +l+ +a + + ++ +W +ar +g g+t++++k ++ k+l ONIVA02G03520.1 4 SWTTKQNKLFERALATYDKDtpgRWQNVARAVGGGKTAEEVKRHYDKLL 52 7********************************************8875 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MSSSWTTKQN KLFERALATY DKDTPGRWQN VARAVGGGKT AEEVKRHYDK LLQDLHHIES 60 AGRQGSQYGG SSSSKSKGGS SSGEQRAAEL TTLLESRMTN FYTNFQVDEI GRVVSVGDGI 120 ARVYGLNEIQ AGEMVEFASG VKGIALNLEN ENVGIVVFGS DTAIKEGDLV KRTGSIVDVP 180 AGKAMLGRVV DALGVPIDGK GALSDHERRR VEVKAPGIIE RKSVHEPMQT GLKAVDSLVP 240 IGRGQRELII GDRQTGKTAI AIDTILNQKQ MNSRGTNESE TLYCVYVAIG QKRSTVAQLV 300 QILSEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA 360 YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGGVSAY 420 IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY 480 REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYEPLP IEKQIVVIYA AVNGFCDRMP 540 LDRISQYEKA ILSTINPELL KSFNEKGGLT NERKIEPDAS LKQTAKEIN

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MSSSWTTKQN KLFERALATY DKDTPGRWQN VARAVGGGKT AEEVKRHYDK LLQDLHHIES  60
AGRQGSQYGG SSSSKSKGGS SSGEQRAAEL TTLLESRMTN FYTNFQVDEI GRVVSVGDGI  120
ARVYGLNEIQ AGEMVEFASG VKGIALNLEN ENVGIVVFGS DTAIKEGDLV KRTGSIVDVP  180
AGKAMLGRVV DALGVPIDGK GALSDHERRR VEVKAPGIIE RKSVHEPMQT GLKAVDSLVP  240
IGRGQRELII GDRQTGKTAI AIDTILNQKQ MNSRGTNESE TLYCVYVAIG QKRSTVAQLV  300
QILSEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA  360
YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGGVSAY  420
IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY  480
REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYEPLP IEKQIVVIYA AVNGFCDRMP  540
LDRISQYEKA ILSTINPELL KSFNEKGGLT NERKIEPDAS LKQTAKEIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75250.1	5e-23	MYB_related family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G03520.1