PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G03290.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ARF
Protein Properties Length: 1170aa    MW: 129947 Da    PI: 6.9875
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G03290.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B365.86.6e-21148249199
                      EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                      f+k+lt sd++++g +++p++ ae++       + +++  ++l+ +d + ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+    ++
  ONIVA02G03290.1 148 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVV--RD 237
                      99*****************************954.4444.49**********************************************99..55 PP

                      SEE..EEEEE-S CS
               B3  88 sefelvvkvfrk 99 
                      ++ +l+++++r+
  ONIVA02G03290.1 238 EKHQLLLGIRRA 249
                      788889999997 PP

2Auxin_resp117.51.1e-38274357183
       Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                      aahaa+++s+F+++YnPras++eFv++++k++kal+ +++s+GmRf+m+fete+  +rr++Gt++g+sdldpvrW+nS+Wr+L+
  ONIVA02G03290.1 274 AAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYsNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQ 357
                      79*********************************989********************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1170 aa     Download sequence    
MASMKQQQTP ASSAVTAAAA ASSSATAAVA ACEGERKAAA INSELWHACA GPLVSLPPVG  60
SLVVYFPQGH SEQVAASMQK DVDAHVPSYP NLPSKLICLL HGVNLHADPD TDEVYAQMTL  120
QPVNTYGKEA LQLSELALKQ ARPQMEFFCK TLTASDTSTH GGFSVPRRAA EKIFPPLDFS  180
MQPPAQELQA RDIHDNVWTF RHIYRGQPKR HLLTTGWSLF VSGKRLFAGD SVIVVRDEKH  240
QLLLGIRRAN RQPTNISSSV LSSDSMHIGV LAAAAHAAAN SSPFTIFYNP RASPTEFVIP  300
FAKYQKALYS NQISLGMRFR MMFETEELGT RRYMGTITGI SDLDPVRWKN SQWRNLQVGW  360
DESAAGERRN RVSIWEIEPV AAPFFLCPQP FFGVKRPRQL DDESEMENLF KRAMPWLGEE  420
VCIKDTQNQN STAPGLSLVQ WMNMNRQQSS SLANTAAQSE YLQALGNPAM QNLAADELAR  480
QLYVQNNLLQ QNCIQFNSPK LPQQMQTMND LSKAAIPLNQ LGAIINPQDQ KQDAVSHQRQ  540
QNSIQVIPLS QAQSNLVQAQ VIVQNQMQQQ KPSPTQNPQR INGQRLLLSH QQKDQNLQLQ  600
QQLLLQQKQQ LQQQQQQQQQ NQQQLNKSLG QLVNLASQQS KLFDEELQLQ ILQKLQQQSL  660
MSQSTSTLSQ PPLIQEQQKL ITDMQKQLSN SHSLAQQQMM PQQEIKPSLQ ATPLLPTVQQ  720
EQQQKLLQKQ VSLADVSGVA FQPISSTNVI PKTGGAMIIS GATQSVVTEE MPSCSTSPST  780
ANGNHFTQST KNRHCINTER LPPSTAPMLI PTSIDAVTAT PLMTKELPKP NNNVKQSVVN  840
SKLPNVAPGP QNCINHALQT DNLETSSSAT SLCPSRTDGL VHQGFPSSNF NQHQMFKDAL  900
PDVEMEGVDP SNSGLFGINN DNLLGFPIET EDLLINALDS VKYQNHISTD VENNYPMQKD  960
ALQEISTSMV SQSFGQSDMA FNSIDSAIND GAFLNKNSWP AAPLLQRMRT FTKVYKRGAV  1020
GRSIDIGRYS GYEELKHALA RMFGIEGQLE DRQRIGWKLV YKDHEDDILL LGDDPWEEFV  1080
NCVRCIRILS PQEVQQMSLD GDLGSNVLPN QACSSSDGVN GWRPRCDQNP GNPSIGPKHP  1140
HLKVPFTIEV RIILIAPNHD RLLKQQFQAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein