PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G03290.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ARF | ||||||||
Protein Properties | Length: 1170aa MW: 129947 Da PI: 6.9875 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 65.8 | 6.6e-21 | 148 | 249 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++p++ ae++ + +++ ++l+ +d + ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+ ++ ONIVA02G03290.1 148 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVV--RD 237 99*****************************954.4444.49**********************************************99..55 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 ++ +l+++++r+ ONIVA02G03290.1 238 EKHQLLLGIRRA 249 788889999997 PP | |||||||
2 | Auxin_resp | 117.5 | 1.1e-38 | 274 | 357 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras++eFv++++k++kal+ +++s+GmRf+m+fete+ +rr++Gt++g+sdldpvrW+nS+Wr+L+ ONIVA02G03290.1 274 AAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYsNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQ 357 79*********************************989********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1170 aa Download sequence |
MASMKQQQTP ASSAVTAAAA ASSSATAAVA ACEGERKAAA INSELWHACA GPLVSLPPVG 60 SLVVYFPQGH SEQVAASMQK DVDAHVPSYP NLPSKLICLL HGVNLHADPD TDEVYAQMTL 120 QPVNTYGKEA LQLSELALKQ ARPQMEFFCK TLTASDTSTH GGFSVPRRAA EKIFPPLDFS 180 MQPPAQELQA RDIHDNVWTF RHIYRGQPKR HLLTTGWSLF VSGKRLFAGD SVIVVRDEKH 240 QLLLGIRRAN RQPTNISSSV LSSDSMHIGV LAAAAHAAAN SSPFTIFYNP RASPTEFVIP 300 FAKYQKALYS NQISLGMRFR MMFETEELGT RRYMGTITGI SDLDPVRWKN SQWRNLQVGW 360 DESAAGERRN RVSIWEIEPV AAPFFLCPQP FFGVKRPRQL DDESEMENLF KRAMPWLGEE 420 VCIKDTQNQN STAPGLSLVQ WMNMNRQQSS SLANTAAQSE YLQALGNPAM QNLAADELAR 480 QLYVQNNLLQ QNCIQFNSPK LPQQMQTMND LSKAAIPLNQ LGAIINPQDQ KQDAVSHQRQ 540 QNSIQVIPLS QAQSNLVQAQ VIVQNQMQQQ KPSPTQNPQR INGQRLLLSH QQKDQNLQLQ 600 QQLLLQQKQQ LQQQQQQQQQ NQQQLNKSLG QLVNLASQQS KLFDEELQLQ ILQKLQQQSL 660 MSQSTSTLSQ PPLIQEQQKL ITDMQKQLSN SHSLAQQQMM PQQEIKPSLQ ATPLLPTVQQ 720 EQQQKLLQKQ VSLADVSGVA FQPISSTNVI PKTGGAMIIS GATQSVVTEE MPSCSTSPST 780 ANGNHFTQST KNRHCINTER LPPSTAPMLI PTSIDAVTAT PLMTKELPKP NNNVKQSVVN 840 SKLPNVAPGP QNCINHALQT DNLETSSSAT SLCPSRTDGL VHQGFPSSNF NQHQMFKDAL 900 PDVEMEGVDP SNSGLFGINN DNLLGFPIET EDLLINALDS VKYQNHISTD VENNYPMQKD 960 ALQEISTSMV SQSFGQSDMA FNSIDSAIND GAFLNKNSWP AAPLLQRMRT FTKVYKRGAV 1020 GRSIDIGRYS GYEELKHALA RMFGIEGQLE DRQRIGWKLV YKDHEDDILL LGDDPWEEFV 1080 NCVRCIRILS PQEVQQMSLD GDLGSNVLPN QACSSSDGVN GWRPRCDQNP GNPSIGPKHP 1140 HLKVPFTIEV RIILIAPNHD RLLKQQFQAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19220.1 | 0.0 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G03290.1 |