PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G49810.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 454aa    MW: 49208.2 Da    PI: 6.8305
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G49810.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS408.66e-125624491374
             GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkf 93 
                      l++lLl+cA a ++g l +a+a+L+++  la+pdgd+mqR+aa f+eALa+r +r +++l++al  p++++  + +e++aa++ f +++P+l++
  ONIVA01G49810.1  62 LIHLLLNCAAAAAAGRLDAANAALEHIASLAAPDGDAMQRVAAAFAEALARRALRAWPGLCRALlLPRASP--TPAEVAAARRHFLDLCPFLRL 153
                      689************************************************************94444444..6899999************** PP

             GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                      +  +aNq Ilea+e+e+ vH+iD++    +QW+ Ll+ La+Rpegpp+lR+T v++    +ke l +t+  L+k Ae+l+vpf+fn+ v++rl+
  ONIVA01G49810.1 154 AGAAANQSILEAMESEKIVHVIDLGGADATQWLELLHLLAARPEGPPHLRLTSVHE----HKELLTQTAMALTKEAERLDVPFQFNP-VVSRLD 242
                      ********************************************************....9**************************.7***** PP

             GRAS 188 dleleeLrvkpgEalaVnlvlqlhrll....................desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleal 261
                      +l++e+Lrvk+gEala++++lqlh ll                    +   +++s+ d++L ++++lsPkv+vv+eqea+hn++ + erf+eal
  ONIVA01G49810.1 243 ALDVESLRVKTGEALAICSSLQLHCLLasdddatagaggdkerrspeSGLSPSTSRADAFLGALWGLSPKVMVVAEQEASHNAAGLTERFVEAL 336
                      ******************************************9997522233344789************************************ PP

             GRAS 262 eyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveees 355
                      +yy+alfd+le++++r s er+ vEr llg+ei+n+vac g errerhe+le+W +rle aGF+ vpls++a  qa+++ +  + dg++v ee+
  ONIVA01G49810.1 337 NYYAALFDCLEVGAARGSVERARVERWLLGEEIKNIVACDGGERRERHERLERWARRLEGAGFGRVPLSYYALLQARRVAQGLGCDGFKVREEK 430
                      ********************************************************************************************** PP

             GRAS 356 gslvlgWkdrpLvsvSaWr 374
                      g ++l+W+dr+L+svSaWr
  ONIVA01G49810.1 431 GNFFLCWQDRALFSVSAWR 449
                      ******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
MNARAGAALA RLMVQDEGSS SSVTSSPLHN FSNMPLHPAA AASPTPPWMV RELRSDERGL  60
CLIHLLLNCA AAAAAGRLDA ANAALEHIAS LAAPDGDAMQ RVAAAFAEAL ARRALRAWPG  120
LCRALLLPRA SPTPAEVAAA RRHFLDLCPF LRLAGAAANQ SILEAMESEK IVHVIDLGGA  180
DATQWLELLH LLAARPEGPP HLRLTSVHEH KELLTQTAMA LTKEAERLDV PFQFNPVVSR  240
LDALDVESLR VKTGEALAIC SSLQLHCLLA SDDDATAGAG GDKERRSPES GLSPSTSRAD  300
AFLGALWGLS PKVMVVAEQE ASHNAAGLTE RFVEALNYYA ALFDCLEVGA ARGSVERARV  360
ERWLLGEEIK NIVACDGGER RERHERLERW ARRLEGAGFG RVPLSYYALL QARRVAQGLG  420
CDGFKVREEK GNFFLCWQDR ALFSVSAWRG RRFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-126GRAS family protein