PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G49740.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 202aa    MW: 22307.3 Da    PI: 9.5534
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G49740.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.46.1e-19171484128
              NAM   4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.....tksgyWk..atgkdk 90 
                      G+ F+Pt++el+ ++L+++++g   +++ ++ e+d + + Pw+L ++ +++++e +fFs r++++++ +r+           g W   +t + +
  ONIVA01G49740.1  17 GVGFEPTEDELMLHFLRPQLRGFAPRVAGAVVEADPCGAAPWELLAR-HGRREEGFFFSARARRKPSVRRTVAGgggggGGGGAWMhsSTKNGQ 109
                      999*********************9**999**************744.4566788********999765555534554444899*843556667 PP

              NAM  91 evlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                      +v++ +  + +++    fy +g+  + ++t W+m ey++
  ONIVA01G49740.1 110 SVTDLGVVVRWCRINYCFYvRGEMGQQRSTGWMMAEYEI 148
                      8888788999*********888999999*********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MGKEMNLIRE DEYGGGGVGF EPTEDELMLH FLRPQLRGFA PRVAGAVVEA DPCGAAPWEL  60
LARHGRREEG FFFSARARRK PSVRRTVAGG GGGGGGGGAW MHSSTKNGQS VTDLGVVVRW  120
CRINYCFYVR GEMGQQRSTG WMMAEYEITD PRCYRRADDG EEDDFWVLCH VRKSSRPSAA  180
KISPAKPARR RKPTAAVDVR AA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.22e-11NAC family protein