PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G48990.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | HB-other | ||||||||
Protein Properties | Length: 1168aa MW: 127767 Da PI: 8.5025 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 21.3 | 4.6e-07 | 74 | 130 | 1 | 57 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++R ++++ ++ +++lF+++ ++ ++e +e++++ g+t +qV+ +F +R++ +k ONIVA01G48990.1 74 KKPRDLLNPKAVKSMQSLFAMKDTIGKKETREISASFGVTVTQVREFFASQRTRVRK 130 799***************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1168 aa Download sequence |
MELVPFKPEA GALVESGGGA HGDSIPAMVA AQQELLHAQV DQLQLLVVAQ CRLTGVNPLA 60 QEMAAGALSI KIGKKPRDLL NPKAVKSMQS LFAMKDTIGK KETREISASF GVTVTQVREF 120 FASQRTRVRK LVRLSREKAL RIESSKAPDN VCSISTEQTP VDIEAHAQVI EPLRTLEPLE 180 AQQISLPHLV VPQISLQLPV VPQSCAIPVA PIGVMQPTEA KTNPDPIQKE TKQEEVAGVE 240 SEDKKFLESI FVLMRKENTF SGQVKLMESI LQINNVTVLS WFLTMGGLAI VSTWLGQAVT 300 EEQTTVILVV FKVLLHLPLH KALPAHMSTV LQTINRLRFY RTQDISSKAR NLLSRLSKVL 360 VRSQALKKSQ KDLICKQRIS EILRDESWKS EVDITEDILA LTDDASESRM PEPRKTPLLL 420 TASADESNKK SSLQTKSKEK RKVLLVEHPN RKAAGKNVNP VRSTSTNNSR PLSADDIQKA 480 KMRAMFMQEK YGKVDTSKVT EKPHMMEIQK PSGLVDSNVP LVPRTPLTSI IKQPVDPSPS 540 TSKQSTLSPP DKPEIAVSLK LNVTAKENFI EKLDSKRVIW QIPPEVWIDP AWSLGAGENS 600 KEFEVQTQRN RREKETFYAS LKDIPLNPKG PWDVEMDFDD SLTPEIPIEQ PPDADAMETD 660 SVSTAPPNIV VPVVDKQIGS TSSVSPAVAA GANGAASEPD LELLAVLLKN PQLVFALTSN 720 QGGTLPSEQT VALLDMLKQT GLGLSELVNS LANNSGVQKE PESGPEAIPA SLPSPTPPKD 780 LIARDGWSSE FPSQVRTQNL QHAHLPNRAN APPVASSVQQ SFSNVVSSLP SQPYASASAL 840 PAQTRTNMTS LPQSVISVNP STQHVAPMNN LLSRATVHQH TQSYALTSDP AAVAVHHQPA 900 VNKLAHEVQS ISHPAVSHSS VAESHASYTS YTWQSSVATI AATGRNATPD RWAAPARTTN 960 SFNAAPSNSN HVTYPNQNAY SNHSTQATTY NSYGSAPVSS HSLHPGQGLD RNGYTHAAEY 1020 QTTTARDALR QNSRSPELGA GAVYGSSSQG YVPEPSRQWN YGQQSYNPEP SSRQWSSGQQ 1080 SYNTVTAEPS RQWSSGQQSY SNPAEPSRQW SSSAHAQPSY NPEPSRPWNS GHQSQNPEAS 1140 RQWSHHHGKQ ERYNPTDGRN SYDQHWRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02560.2 | 1e-147 | HB-other family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G48990.1 |