PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G48300.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | CAMTA | ||||||||
Protein Properties | Length: 850aa MW: 96337.5 Da PI: 7.1853 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 174.8 | 1.2e-54 | 12 | 130 | 1 | 118 |
CG-1 1 llke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenpt 93 l++e k+rwlk++e+++iL+n++++ +t++++++p+sg+++L+nr+++ryfr+DGy+w+kkk+gkt+ E+he+LKv++v++l+cyYah+++n+t ONIVA01G48300.2 12 LHQEvKSRWLKPKEVLQILQNHDRFIITHKTPHKPPSGAWFLFNRRVLRYFRNDGYEWRKKKNGKTIAEAHERLKVDNVDALNCYYAHADKNST 105 567889**************************************************************************************** PP CG-1 94 fqrrcywlLeeelekivlvhylevk 118 fqrr+yw+L+ ++++iv+vhy++v+ ONIVA01G48300.2 106 FQRRIYWMLDPAYDHIVFVHYRDVQ 130 **********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 850 aa Download sequence |
MQQQQGFDTH RLHQEVKSRW LKPKEVLQIL QNHDRFIITH KTPHKPPSGA WFLFNRRVLR 60 YFRNDGYEWR KKKNGKTIAE AHERLKVDNV DALNCYYAHA DKNSTFQRRI YWMLDPAYDH 120 IVFVHYRDVQ EGSISVSALN DSSTSNQNGS GSRAEAQSSP GLTSELFAPC LNSCSPGSAE 180 EVSSQIMAIN NETNSVSQPD WVQHCNQAAL RKLKVQLSLE DREDHDVDAK DIPSNSEPIT 240 VYGIQNEEPG TCRNLADVFS GLEFSKENHP EETGLPFSST IDVLKNSDTW LEEDQIEAIL 300 HSASMIVTEN QWFNIREVSP EWSYCSESTK VIIAGDFLRD PSHGSWAIVF GDVKVHAEIV 360 QQGVIRCHTP CLDARKVTMY LIDENEKACS EARQFEFHNK PTKSVVCENR KPCREVHESE 420 LHQRPTESNN ELLLLFNYAQ LLFDGHVSEQ FLKFGLPFPN LECGLQVSPS EIMKGTSERL 480 NRDTTVNCVM EVLLNNKFEE WLFSKYEQNS EGNHFLPRQY HGVIHTIAAL GYNWALKLLL 540 NSGVLVNYRD ANGWTALHWA ARFGREETVV LLLDAGAAAG ALSDPTAQDP AAKTPASVAS 600 AYGFKGLSAY LSEAELIAHL HSLESKENGS SGDQISRVVG RISDTSAHAQ SGSDDQLALK 660 ESLGAMRYAV QAAGRIQTAF RIFSFRKKQQ AGLQNRGNHI ISIREVGAAS HGMLEKAALS 720 IQKNFRCWKK RKEFLKIRKN VIKIQARVRA HQQHNKYKEL LRSVGILEKV MLRWYRKGVG 780 LRGFHPGAIA MPIDEEDEDD IAKVFRKQRV ETALNEAVSR VSSIIDSPVA RQQYRRMLEM 840 HKQNKDDDEK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 729 | 758 | KKRKEFLKIRKNVIKIQARVRAHQQHNKYK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 1e-106 | CAMTA family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G48300.2 |