PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G48030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 166aa MW: 18154.4 Da PI: 5.3046 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.5 | 7.9e-19 | 21 | 70 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr ++ +g+++AeIrd + ng r++lg+f++aeeAa a+++a+ +++g ONIVA01G48030.1 21 FRGVRKRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAEEAALAYDQAAFAMRG 70 79******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MDAHGQEEEE EPMQVQQQQA FRGVRKRPWG KFAAEIRDST RNGVRVWLGT FDSAEEAALA 60 YDQAAFAMRG SAAVLNFPME QVRRSMDMSL LQEGASPVVA LKRRHSMRAA AAGRRRKSAA 120 PAPADQEGGG GVMELEDLGP DYLEELLAAS QPIDITCCTS PSHHSI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 102 | 117 | KRRHSMRAAAAGRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 2e-31 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G48030.1 |