PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G46270.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family C2H2
Protein Properties Length: 321aa    MW: 35021.3 Da    PI: 4.3787
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G46270.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.00013294317123
                      EEETTTTEEESSHHHHHHHHHH.T CS
          zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                      y C+ C+k+F++++ L+ H +  H
  ONIVA01G46270.1 294 YACKPCNKTFNTSMGLEAHSKAkH 317
                      78999**************88777 PP

Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
METTMGFWGV AVRPGETVMC DPPGEFYYHI SQIALEPGEL NENVQVFGEV DGKRILLGTL  60
SVEHRPQLSI DLEFFSLTFC LAVCTSDSPT EEGDESDEEV PLAIPLFPNS DDDKIKEVQN  120
SPSKFATLKS AAAASPTPEA IVEERKNYGK SEADDDDSDE ESDASGEDEY DDEEDMIDKQ  180
DSSDDDGDSS DEEETPSKNT KGTNRHVETP LNTPPQKRAR LATPIMDSKA GTGKRSGYVH  240
VATPYPAKQA KKTPVNNDMA KQSSGYVHVA TPYPAKQAKK RTANNDMSEH SAGYACKPCN  300
KTFNTSMGLE AHSKAKHTAT K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03740.15e-11C2H2 family protein