PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G46020.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 673aa MW: 75529.1 Da PI: 5.9778

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G46020.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.1	9.1e-15	82	169	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffk++ +++++ + +p +fa+++ + + + led g +W+v+l +++ ++ GWk+Fv ++++ +g+f+vF+ + rs f +v ONIVA01G46020.1 82 FFKIM--VGYFSEN-MDIPLPFARTITDMT--GSNVYLEDAYGLRWRVRL--YLHDDVLSFGHGWKNFVLDHDISVGEFLVFRQIARSVF--TV 166 66666..5566666.9********6443..337***********..999999***********************9998999..88 PP EEE CS B3 95 kvf 97 ++f ONIVA01G46020.1 167 QIF 169 877 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MVELIKVPKI EQEEGNADSH GKEKADVVHE EKTEKVKRRR KRVSDPQRKK ACVDCTKRCI 60 RIHGMASSSS EKARPTPTLP SFFKIMVGYF SENMDIPLPF ARTITDMTGS NVYLEDAYGL 120 RWRVRLYLHD DVLSFGHGWK NFVLDHDISV GEFLVFRQIA RSVFTVQIFA ISACERIHLC 180 ERNKRQSRKR KPGRKTGYPA DNQMVKVSSK DVVKRRKKQR TDEQIYDLDP RQHDMPVRVC 240 IDSGSELRCS ESSVKELDAA PDKSHAVVQV PATECNADPS YNAAGMKTIK NLEAIGESSS 300 TKDVTWDANK SEDYPSFSYP ESSNVMTADK ESERSHQDRP MQLYCELGLE DGNAETENCE 360 NSNVLENAEL RTPLAMMDLN EVGIDDIFLS ADIYEFDSDF CSPEAFSVDV NTEGLVANGR 420 TPGDCFGVPE TSRCLENKQM TDVPRTSTDD GSIAVHGIDI NALPSNTYPD IGQGNTYPDI 480 DAAPDDCKKD KDVLHSECNK VAQKAHYSVK QDITKDGPRQ IAAEIMSSDP KTCELTYVRK 540 NSVQPGTSSV SQWNNSKGQE SGGTKSCVVL AVAANSKKFC ITIPPPDQTW LELPRRLPVL 600 PRTKKQARKI LILKDPSMRF WPVLYQCTPK FNGFIAGWAD ISRENNLREG DTCEFELCSN 660 SELSFQVLVP NLQ

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MVELIKVPKI EQEEGNADSH GKEKADVVHE EKTEKVKRRR KRVSDPQRKK ACVDCTKRCI  60
RIHGMASSSS EKARPTPTLP SFFKIMVGYF SENMDIPLPF ARTITDMTGS NVYLEDAYGL  120
RWRVRLYLHD DVLSFGHGWK NFVLDHDISV GEFLVFRQIA RSVFTVQIFA ISACERIHLC  180
ERNKRQSRKR KPGRKTGYPA DNQMVKVSSK DVVKRRKKQR TDEQIYDLDP RQHDMPVRVC  240
IDSGSELRCS ESSVKELDAA PDKSHAVVQV PATECNADPS YNAAGMKTIK NLEAIGESSS  300
TKDVTWDANK SEDYPSFSYP ESSNVMTADK ESERSHQDRP MQLYCELGLE DGNAETENCE  360
NSNVLENAEL RTPLAMMDLN EVGIDDIFLS ADIYEFDSDF CSPEAFSVDV NTEGLVANGR  420
TPGDCFGVPE TSRCLENKQM TDVPRTSTDD GSIAVHGIDI NALPSNTYPD IGQGNTYPDI  480
DAAPDDCKKD KDVLHSECNK VAQKAHYSVK QDITKDGPRQ IAAEIMSSDP KTCELTYVRK  540
NSVQPGTSSV SQWNNSKGQE SGGTKSCVVL AVAANSKKFC ITIPPPDQTW LELPRRLPVL  600
PRTKKQARKI LILKDPSMRF WPVLYQCTPK FNGFIAGWAD ISRENNLREG DTCEFELCSN  660
SELSFQVLVP NLQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	37	50	KRRRKRVSDPQRKK
2	38	51	KRRRKRVSDPQRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24700.1	3e-11	B3 family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G46020.1