PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G44740.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 464aa    MW: 49727.3 Da    PI: 8.8895
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G44740.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM154.44.9e-48622002128
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.............kvkaeekewyfFskrdkkyatgkrknratksgy 82 
                      +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp              +++ +ekew+f+++rd+ky++g+r+nr+t+sgy
  ONIVA01G44740.1  62 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPGienlinkldggaaMAAIGEKEWFFYVPRDRKYRNGDRPNRVTASGY 154
                      79***************************.89***************557999999888764455999************************** PP

              NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      Wkatg d+ + +++++ +glkktLvfy+g+apkg++++W+m+eyrl
  ONIVA01G44740.1 155 WKATGADRMIRAENNRPIGLKKTLVFYSGKAPKGVRSSWIMNEYRL 200
                      ********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    
MHMRRGRAAG GEGEAAAVVV MSRYDNNGHA AAAAAAAVAG GGGGGGNKAA GEVDGHEDDL  60
VMPGFRFHPT EEELIEFYLR RKVEGKRFNV ELITFLDLYR YDPWELPGIE NLINKLDGGA  120
AMAAIGEKEW FFYVPRDRKY RNGDRPNRVT ASGYWKATGA DRMIRAENNR PIGLKKTLVF  180
YSGKAPKGVR SSWIMNEYRL PPADTDRYHK TEISLCRVYK RTGIDDGHGH VSTARSSAHS  240
RGGGAAPVQD NKQGSSSTST PTPPPTPSKL HLLSSECTSP PAIVTDHAAM AAHKAPSPRH  300
HQQQQQLHAA KPCGGYLQNS SMASAAGGDQ QQQFQQDFAA ALYQQYSKNT SGAFASTYSL  360
LNLVNAASMG SSAAAIDELS SLVGHGTPSY INPAAGSHNY SQFLHLPTTP SSHQPTPAPL  420
GTTTAAAAAT LPMSLAAFSD RIWDWNNPIP EAGGRDYSTS TGFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.18e-98NAC family protein