PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G44280.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 489aa    MW: 54362.3 Da    PI: 4.4813
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G44280.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS432.33.8e-1321204892374
             GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                      ++lL++cA+a+s+ +  +aqa+++ l++++s +gdp qR+aay++e+Laar++ s++++ykal+++e +   +  +l+a+++++e++P+++f++
  ONIVA01G44280.2 120 KQLLFDCATALSDYNVDEAQAIITDLRQMVSIQGDPSQRIAAYLVEGLAARIVASGKGIYKALSCKEPP---TLYQLSAMQILFEICPCFRFGF 210
                      589*****************************************************************9...89999***************** PP

             GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187
                      ++aN aIlea +ge+rvHiiDfdi+qG Q+++L+q L + +++p +lRiTgv++pe++      l+ +g+rL+k+Ae +g++fef++ v  ++ 
  ONIVA01G44280.2 211 MAANYAILEACKGEDRVHIIDFDINQGSQYITLIQFLKNNANKPRHLRITGVDDPETVqrTVGGLKVIGQRLEKLAEDCGISFEFRA-VGANIG 303
                      ********************************************************99778889***********************.799*** PP

             GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                      d+++ +L+++pgEal+Vn+++qlh+l+desvs+ +erd++L++vk+l+Pk+v++veq+a++n+++F +rf e  +yy+alfdsl+a+lpres +
  ONIVA01G44280.2 304 DVTPAMLDCRPGEALVVNFAFQLHHLPDESVSIMNERDQLLRMVKGLQPKLVTLVEQDANTNTAPFQTRFREVYDYYAALFDSLDATLPRESPD 397
                      ********************************************************************************************** PP

             GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      r++vEr++l+reivn++aceg +r+er e ++kWr+r+++aGF+p p+s+++ + +++ll+ + ++ y+ ee++g l +gW +++L++ SaW+
  ONIVA01G44280.2 398 RMNVERQCLAREIVNILACEGPDRVERYEVAGKWRARMTMAGFTPCPFSSNVISGIRSLLKSYCDR-YKFEEDHGGLHFGWGEKTLIVSSAWQ 489
                      ****************************************************************66.*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    
MVTADGHSPS SADNSCSDVA KDSPLVSNVS QQNSQSISDN QSSELEVEFD EDDIRMKLQE  60
LEHALLDDSD DILYEISQAG SINDEWADPM KNVILPNSPK ESESSISCAG SNNGEPRTPK  120
QLLFDCATAL SDYNVDEAQA IITDLRQMVS IQGDPSQRIA AYLVEGLAAR IVASGKGIYK  180
ALSCKEPPTL YQLSAMQILF EICPCFRFGF MAANYAILEA CKGEDRVHII DFDINQGSQY  240
ITLIQFLKNN ANKPRHLRIT GVDDPETVQR TVGGLKVIGQ RLEKLAEDCG ISFEFRAVGA  300
NIGDVTPAML DCRPGEALVV NFAFQLHHLP DESVSIMNER DQLLRMVKGL QPKLVTLVEQ  360
DANTNTAPFQ TRFREVYDYY AALFDSLDAT LPRESPDRMN VERQCLAREI VNILACEGPD  420
RVERYEVAGK WRARMTMAGF TPCPFSSNVI SGIRSLLKSY CDRYKFEEDH GGLHFGWGEK  480
TLIVSSAWQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein