PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | ONIVA01G43630.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 470aa MW: 51751.7 Da PI: 6.8033 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.9 | 1.9e-06 | 231 | 252 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +Cgk F+r nL+ H+r H ONIVA01G43630.2 231 FCLICGKGFKRDANLRMHMRGH 252 5*******************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 470 aa Download sequence |
MQQGILILTN RVFDSVPWTS LHVLQDLVNR SLLFLHSLGF SLPACIYLMT LKLKSKIKQV 60 KDIVQSMSNR ESQVAGGSSE AQAKQQLVTA DLTCIIIQLI STAGSLLPSM KNPISSNPAL 120 RHLSNTLCAP MILGTNCNLR PSANDEATIP DISKTHDYEE LMNSLNTTQA ESDEMMNCQN 180 PCGGEGSEPI PMEDHDVKES DDGGERENLP PGSYVVLQLE KEEILAPHTH FCLICGKGFK 240 RDANLRMHMR GHGDEYKTAA ALAKPSKDSS SESAPVTRYS CPYVGCKRNK EHKKFQPLKT 300 ILCVKNHYKR SHCDKSYTCS RCNTKKFSVI ADLKTHEKHC GRDKWLCSCG TTFSRKDKLF 360 GHVALFQGHT PALPMDDIKV TGASEQPQGS EAMNTMVGSA GYNFPGSSSD DIPNLDMKMA 420 DDPRYFSPLS FDPCFGGLDD FTRPGFDISE NPFSFLPSGS CSFGQQNGDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G34370.2 | 1e-148 | C2H2 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | ONIVA01G43630.2 |