PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G42140.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TALE

Protein Properties

Length: 612aa MW: 65191.6 Da PI: 7.9812

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G42140.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.6	5.6e-10	390	427	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + ONIVA01G42140.1 390 FEHflHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVR 427 554459******************************88 PP
2	BELL	97.3	1.3e-31	254	323	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +e q kk+kL+s++eeV+krY+qy++q+q+v++sFe+vag +a+p+++lAl+a+++hF+cLk +i +q+ ONIVA01G42140.1 254 AEQQWKKTKLISMMEEVCKRYRQYYQQVQAVMASFETVAGFSNAAPFAALALRAMAKHFKCLKSMILNQL 323 5899***************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 612 aa Download sequence
MSSAAGGGGY GGGQGGGAEH HHHHHGHAGH LLLHHHPQHV AGAAVASAAA AAGGQMYHVP 60 QHSRREKLRF PPDAGDSPPP HGHGHGHAPQ QQQQHGSWPP PPAFYSYASS SSSYSPHSPT 120 LAQAQLVAHG LAPPLPQIPT QNFSLSLSSA SSNPPPPQAQ PRRQLGGLAQ ATGPFGPFTG 180 YAAVLGRSRF LGPAEKLFEE ICDVGGAASH VDRTISDEGL LDADPMDGVD HDVVDHDLGG 240 ADRAAADAGP ISGAEQQWKK TKLISMMEEV CKRYRQYYQQ VQAVMASFET VAGFSNAAPF 300 AALALRAMAK HFKCLKSMIL NQLRNTSNKV AVKDGLNKEI AVFGLAGGSS GGAGLQRANS 360 ASAFGQPHNI WRPQRGLPER AVSVLRAWLF EHFLHPYPTD GDKQMLAKQT GLTRNQVSNW 420 FINARVRLWK PMVEEIHNLE MRQMHKHSVV DKGQHSVHHQ AQHSSQCSGN PSVPSDSHPG 480 QSSSITRNHN TAASQGFPDE LSQMSQSIQG QVSFAYNGLT SQHNIASPHH QHQQVGGVGI 540 GGGNGGVSLT LGLHQNNRVC IAEPLPAALP ANLAHRFGLE EVSDAYVMSS FGGQDRHFGK 600 EIGGHLLHDF VG

Sequence ? help Back to Top

Protein Sequence Length: 612 aa Download sequence

MSSAAGGGGY GGGQGGGAEH HHHHHGHAGH LLLHHHPQHV AGAAVASAAA AAGGQMYHVP  60
QHSRREKLRF PPDAGDSPPP HGHGHGHAPQ QQQQHGSWPP PPAFYSYASS SSSYSPHSPT  120
LAQAQLVAHG LAPPLPQIPT QNFSLSLSSA SSNPPPPQAQ PRRQLGGLAQ ATGPFGPFTG  180
YAAVLGRSRF LGPAEKLFEE ICDVGGAASH VDRTISDEGL LDADPMDGVD HDVVDHDLGG  240
ADRAAADAGP ISGAEQQWKK TKLISMMEEV CKRYRQYYQQ VQAVMASFET VAGFSNAAPF  300
AALALRAMAK HFKCLKSMIL NQLRNTSNKV AVKDGLNKEI AVFGLAGGSS GGAGLQRANS  360
ASAFGQPHNI WRPQRGLPER AVSVLRAWLF EHFLHPYPTD GDKQMLAKQT GLTRNQVSNW  420
FINARVRLWK PMVEEIHNLE MRQMHKHSVV DKGQHSVHHQ AQHSSQCSGN PSVPSDSHPG  480
QSSSITRNHN TAASQGFPDE LSQMSQSIQG QVSFAYNGLT SQHNIASPHH QHQQVGGVGI  540
GGGNGGVSLT LGLHQNNRVC IAEPLPAALP ANLAHRFGLE EVSDAYVMSS FGGQDRHFGK  600
EIGGHLLHDF VG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	8e-58	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G42140.1