PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G40370.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 375aa MW: 40398.2 Da PI: 6.0711

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G40370.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	71.8	9.3e-23	123	184	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEE.E-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkve.rsaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK++++s++ r Y++Ct++ +C +kk+v+ r+a +p ++ +tY +eH+++ ONIVA01G40370.1 123 KDGYQWRKYGQKNIQDSNYLRLYFKCTFSrerSCAAKKQVQqRDAGEPPMFLVTYLNEHTCQ 184 7************************998999***7356789***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MAFGQDTIEQ LYRELAGGRR LSAKLQALLE GPLDSRGQKE AVDVSRELGR VFMVSLYMLK 60 PCSNSSRRPE GVTRTAPETR TDDSICLHTP ARVKRVRSEE VLVRNGREEV VTRTEIITPS 120 PYKDGYQWRK YGQKNIQDSN YLRLYFKCTF SRERSCAAKK QVQQRDAGEP PMFLVTYLNE 180 HTCQQPQAVP GTPNTAGSSP TTTSRQRQSS SSPPAEMLDL TMNGAGLFSR LLLPHAVGGG 240 GSAAEEEAAI VTCLAAVISG GGAAAAPPPL IWPTSAPEAA FVASAAGHSP SAADESVADE 300 AAAAQMADMD YCFGQYDQST FGAAAAADHR VLIGDDGDVQ RIVAARIADT VWPRYTRDTS 360 AWETAGTSSM RGSID

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MAFGQDTIEQ LYRELAGGRR LSAKLQALLE GPLDSRGQKE AVDVSRELGR VFMVSLYMLK  60
PCSNSSRRPE GVTRTAPETR TDDSICLHTP ARVKRVRSEE VLVRNGREEV VTRTEIITPS  120
PYKDGYQWRK YGQKNIQDSN YLRLYFKCTF SRERSCAAKK QVQQRDAGEP PMFLVTYLNE  180
HTCQQPQAVP GTPNTAGSSP TTTSRQRQSS SSPPAEMLDL TMNGAGLFSR LLLPHAVGGG  240
GSAAEEEAAI VTCLAAVISG GGAAAAPPPL IWPTSAPEAA FVASAAGHSP SAADESVADE  300
AAAAQMADMD YCFGQYDQST FGAAAAADHR VLIGDDGDVQ RIVAARIADT VWPRYTRDTS  360
AWETAGTSSM RGSID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01900.1	7e-19	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G40370.1