PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G40310.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 229aa MW: 25513.6 Da PI: 6.2753 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 30.6 | 6.7e-10 | 34 | 76 | 20 | 58 |
S-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS CS WRKY 20 fprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnh 58 + YYrCt++ gCp+ k+ve+ +edp ++ ++Y++eH++ ONIVA01G40310.1 34 AMKCYYRCTYHqdhGCPASKHVEQHnSEDPPLFRVIYTNEHTC 76 5678******98999*******9852689************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MVKRSDNMDS SSECSRGAHK RLLQDSRSYD QENAMKCYYR CTYHQDHGCP ASKHVEQHNS 60 EDPPLFRVIY TNEHTCGTSN SASDYMASSM QIQQIADASL RKAQAAERLR KAEVETPRLM 120 HFPPPRCSGG YNMAMKEEKD VIVSSLLTVI RGCHIAESAG NNSAAALPVN RPPPAVARSD 180 HYSCSYAISP ELLPASDDLT LDFMLDSVLD PHWVEPLDLA WLKESTHTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22570.1 | 2e-10 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G40310.1 |