PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G39770.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bZIP

Protein Properties

Length: 346aa MW: 36924.4 Da PI: 10.1122

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G39770.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.7	3.9e-16	276	326	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN +Lk + +el +++ ONIVA01G39770.1 276 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLK-RQKELDELI 326 79***************************************9.666666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MGSQTMASKA GGGGVARRGG GRMRSLGRQG SMYSLTLDEV QSQLGEPLHS MNLDELLRSV 60 FPDGLAIADG AGAGAGATTS SQQHQPGSGL LRQGSITMPP ELSKKTVDEV WKGIQAAPKR 120 NAETGGGGGG GGGRRRRERQ PTLGEVTLED FLVKAGVVTQ GSLKELSDVG NVDPVGRGVT 180 ATGTVDLAPG SHWIEQYKQQ IASTDAHHHG QQGVQGAYFP NRLVPQPLNV GPGAILEPSY 240 SDGQTSSGMI GGMSDSQTPG RKRGMSGDVA DKLMERRQKR MIKNRESAAR SRARKQAYTN 300 ELENKVSRLE EENVRLKRQK ELDELICAVP VPEPKYQLRR TSSADF

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MGSQTMASKA GGGGVARRGG GRMRSLGRQG SMYSLTLDEV QSQLGEPLHS MNLDELLRSV  60
FPDGLAIADG AGAGAGATTS SQQHQPGSGL LRQGSITMPP ELSKKTVDEV WKGIQAAPKR  120
NAETGGGGGG GGGRRRRERQ PTLGEVTLED FLVKAGVVTQ GSLKELSDVG NVDPVGRGVT  180
ATGTVDLAPG SHWIEQYKQQ IASTDAHHHG QQGVQGAYFP NRLVPQPLNV GPGAILEPSY  240
SDGQTSSGMI GGMSDSQTPG RKRGMSGDVA DKLMERRQKR MIKNRESAAR SRARKQAYTN  300
ELENKVSRLE EENVRLKRQK ELDELICAVP VPEPKYQLRR TSSADF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	140	GRRRRERQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-71	bZIP family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G39770.1