PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G38360.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HD-ZIP
Protein Properties Length: 737aa    MW: 81427.1 Da    PI: 8.0899
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G38360.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox42.21.4e-1368122256
                      T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
         Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                      r+ +++t +q e+Le +F  + +p+  ++++L++ +gL  +qVk+WFqN+R++ k
  ONIVA01G38360.1  68 RRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVK 122
                      445789*********************************************9877 PP
2START89.56.9e-292224382205
                      HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S...EEEEE CS
            START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla...kaetl 82 
                      la  a+ +l+ +a++  ++W+ ++    e +n++  + +  ++++      +++ea ra+ +v m+   +v  l+d    + + ++   + +++
  ONIVA01G38360.1 222 LAKNAMHALIILAESHVALWFPVPgcsyEVLNKMMAYDQAYPGDNsanaigFKTEATRAVSMVMMDYKSVVDFLMDPY-NYRTFFPeviSGAVT 314
                      678899999999************999955555555555555555566699999************996665555555.555555544499999 PP

                      EEECTT.......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE CS
            START  83 evissg.......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwve 168
                      ++i +        g++qlm+ e++++splvp R+ +f+Ry+  l++g  v+ dvS+d  +  +      ++++ pSg+li++   + +kvt +e
  ONIVA01G38360.1 315 NRIYTWptsdgynGVIQLMTVEMMFPSPLVPaRKCTFLRYCNVLNEGLVVVIDVSLDDGSIFS------KCRKMPSGFLIQSIRPNSCKVTAIE 402
                      99977777789*********************************************9988866......7************************ PP

                      -EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
            START 169 hvdlkgrlphwllrslvksglaegaktwvatlqrqce 205
                      hv +++  +h+l+++ ++ gl++ga++wvat+ rq +
  ONIVA01G38360.1 403 HVLVDDTGVHELYQPCMN-GLVFGARRWVATMARQSA 438
                      ***************985.89***********99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 737 aa     Download sequence    
MEMNQQHNEG NESFVALMNG VAGDGTATLP NDGEQSMSIP ARELFAAIEA DSGLLPVNSS  60
NTNEKRKRRL QRLTGKQSEV LEGFFSICGH PDDGQKRHLS ETTGLGLDQV KFWFQNKRTQ  120
VKTMCWKEEN YKLSVENEIL RDENRRVKIA HCTAICLTCR NSSVQNQLAV EMERLMGQSE  180
WLQQEIARSN GTPPAANLAF QLNSSADYVF SGQHDQQMIA ELAKNAMHAL IILAESHVAL  240
WFPVPGCSYE VLNKMMAYDQ AYPGDNSANA IGFKTEATRA VSMVMMDYKS VVDFLMDPYN  300
YRTFFPEVIS GAVTNRIYTW PTSDGYNGVI QLMTVEMMFP SPLVPARKCT FLRYCNVLNE  360
GLVVVIDVSL DDGSIFSKCR KMPSGFLIQS IRPNSCKVTA IEHVLVDDTG VHELYQPCMN  420
GLVFGARRWV ATMARQSARM RDVHHNKTAP QVSTKGRKNL MKLADDLLAS FAGGITATGG  480
GTWTVVIGAG TEKDIRVAYR RTTEGSSSYN AILSVSASLR LPLPMRKTFD LLRNLTHRCK  540
WDVLVHGSVV KEEVTIARGV GNDDTVTVLH CKRAGREDRG RTMILQNNGY DASGSFMVYS  600
QIDSELMNTM VLSPSDLPPG RGGPSLYPTG FSLLPDVEAA QDSSGIALGE VGGTLMTMGF  660
QIPVKLASGD RMYSRSAASA IRLMTDTIAL VKKTLMNEHS GIYGVSPEKR EVRVQIKIKN  720
MRRGFIGSDH PASPRIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.21e-102HD-ZIP family protein